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Année Titre de la publication Auteurs Nom de la publication Site Référence Lien vers résumé
2017 Recent advances in high-throughput 13C-fluxomics Heux S, Bergès C, Millard P, Portais JC, Létisse F. Metab Eng MetaToul
2017 The metabolic enzyme fructose-1,6-bisphosphate aldolase acts as a transcriptional regulator in pathogenic Francisella. Ziveri J, Tros F, Guerrera IC, Chhuon C, Audry M, Dupuis M, Barel M, Korniotis S, Fillatreau S, Gales ... Anal Chem MetaToul
2017 Bio-based succinate from sucrose: High-resolution 13C metabolic flux analysis and metabolic engineering of the rumen bacterium Basfia succiniciproducens. Lange A, Becker J, Schulze D, Cahoreau E, Portais JC, Haefner S, Schröder H, Krawczyk J, Zelder O, Wittmann ... MetaToul
2017 A methodology for the validation of isotopic analyses by mass spectrometry in stable-isotope labelling experiments. Heuillet M, Bellvert F, Cahoreau E, Letisse F, Millard P, Portais JC. MetaToul
2016 Assessment of antioxidant activity and neuroprotective capacity on PC12 cell line of Frankenia thymifolia and related phenolic LC-MS/MS identification. Ben Mansour R, Ksouri WM, Cluzet S, Krisa S, Richard T, Ksouri R 8. 10.1155/2016/2843463 BMP
2016 Hyphenating centrifugal partition chromatography with nuclear magnetic resonance through automated solid phase extraction. Analytical Chemistry 88: 9941-9948. Bisson J, Brunel M, Badoc A, Da Costa G, Richard T, Mérillon J-M, Waffo-Téguo P 88: 9941-9948 BMP
2016 A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana. Bonnot C, Pinson B, Clement M, Bernillon S, Chiarenza S, Kanno S (2016) 209: 161-176 BMP
2016 BHighly repeatable dissolution dynamic nuclear polarization for heteronuclear NMR metabolomics. Bornet A, Maucourt M, Deborde C, Jacob D, Milani J, Vuichoud B, Ji X, Dumez J-N, Moing A, Bodenhausen ... 88: 6179-6183. BMP DOI: 10.1021/acs.analchem.6b01094
2016 The peach HECATE3-like gene FLESHY plays a double role during fruit development. Botton A, Rasori A, Ziliotto F, Moing A, Maucourt  M, Bernillon S, Deborde C, Petterle A, Varotto S, ... 91: 97-114. BMP DOI 10.1007/s11103-016-0445-z
2016 A CURLY LEAF homologue controls both vegetative and reproductive development of tomato plants. Boureau L, How-Kit A, Teyssier E, Drevensek S, Rainieri M, Joubes J, Stammiti L, Pribat A, Bowler C, ... 90: 485-501 BMP DOI 10.1007/s11103-016-0436-0
2016 Branched glycosylated inositolphosphosphingolipid structures in plants revealed by MS3 analysis. Buré C, Cacas J-L, Badoc A, Mongrand S, Schmitter J-M (2016) 51: 305-308. BMP
2016 Re-visiting plant plasma membrane lipids in tobacco: a focus on sphingolipids. Cacas JL, Buré C, Grosjean K, Gerbeau-Pissot P, Lherminier J, Rombouts Y, Maes E, Bossard C, Gronnier ... 170: 367-384 BMP doi:
2016 Diacylglycerol kinases activate tobacco NADPH oxidase-dependent oxidative burst in response to cryptogein. Cacas J-L, Gerbeau-Pissot P, Fromentin J, Cantrel C, Thomas D, Jeannette E, Kalachova T, Mongrand S, ... 10.1111/pce.12771 BMP
2016 Unusual compounds from Galium mollugo and their inhibitory activities against ROS generation in human fibroblasts. Chaher N, Krisa S, Delaunay J-C, Bernillon S, Pedrot E, Mérillon J-M, Atmani D, Richard T (2016) 117: 79-84 BMP doi:10.1016/j.jpba.2015.07.027
2016 Respiration climacteric in tomato fruits elucidated by constraint-based modelling. Colombié S, Beauvoit B, Nazaret C, Bénard C, Vercambre G, Le Gall S, Biais B, Cabasson C, Maucourt M, ... BMP doi:10.1111/nph.14301
2016 Primary alcohols are major components of suberized root tissues of Arabidopsis in the form of alkyl hydroxycinnamates. Delude C, Fouillen L, Bhar P, Cardinal M-J, Pascal S, Santos P, Kosma DK, Joubès J, Rowland O, Domergue ... BMP
2016 Requirement of phosphoinositides containing stearic acid to control cell polarity. Doignon F, Laquel P, Testet E, Tuphile K, Fouillen L, Bessoule JJ (2016) 36: 765-780. BMP doi:10.1128/MCB.00843-15
2016 Fortune telling: metabolic markers of plant performance. Fernandez O, Urrutia M, Bernillon S, Giauffret C, Tardieu F, Le Gouis J, Langlade N, Charcosset A, Moing ... '12: 158 BMP DOI 10.1007/s11306-016-1099-1
2016 GIPC: Glycosyl Inositol Phospho Ceramides, the major sphingolipids on earth. Mini-Review. Gronnier J, Germain V, Gouguet P, Cacas JL, Mongrand S (2016) 11: e1152438. BMP DOI 10.1080/15592324.2016.1152438
2016 Grapevine cane's waste is a source of bioactive stilbenes. Guerrero RF, Biais B, Richard T, Puertas B, Waffo-Teguo P, Merillon J-M, Cantos-Villar E 94: 884-892. BMP
2016 Daily Preharvest UV-C light keeps high stilbenoid concentration in grape. Guerrero RF, Cantos-Villar E, Puertas B, Richard T 10.1021/acs.jafc.6b01276 BMP
2016 Effects of gluconic and alcoholic fermentation on anthocyanin composition and antioxidant activity of beverages made from strawberry Hornedo-Ortega R, Krisa S, García-Parrilla CM, Richard T (2016) 69: 382-389. BMP
2016 Trace element bioavailability, yield and seed quality of rapeseed (Brassica napus L.) modulated by biochar incorporation into a contaminated technosol. Marchand L, Pelosi C, González-Centeno MR, Maillard A, Ourry A, Galland W, Teissedre P-L, Bessoule J-J, ... 156: 150-162. BMP
2016 Olive and grape seed extract prevents post-Traumatic osteoarthritis damages and exhibits in vitro anti IL-1? activities before and after oral consumption Mével E, Merceron C, Vinatier C, Krisa S, Richard T, Masson M, Lesoeur J, Hivernaud V, Gauthier O, Abadie ... 610.1038/srep33527 BMP
2016 Phenolic contents and bioactive potential of peach fruit extracts. Mokrani A, Krisa S, Cluzet S, Da Costa G, Temsamani H, Renouf E, Mérillon J-M, Madani K, Mesnil M, Monvoisin ... 202: 212-220. BMP
2016 An ethoxylated surfactant enhances the penetration of the sulfated laminarin through leaf cuticle and stomata, leading to increased induced resistance against grapevine downy mildew. Paris F, Krzyzaniak Y, Gauvrit C, Jamois F, Domergue F, Joubès J, Ferrières V, Adrian M, Legentil L, ... 156: 338-350. BMP
2016 The Glycerol-3-Phosphate acyltransferase GPAT6 from tomato plays a central role in fruit cutin biosynthesis. Petit J, Bres C, Mauxion JP, Tai FW, Martin LB, Fich EA, Joubes J, Rose JK, Domergue F, Rothan C 171: 894-913. 10.1104/pp.16.00409 BMP
2016 Determination of phenolic composition and antioxidant activities of Pancratium maritimum L. from Tunisia. Rokbeni N, M'rabet Y, Cluzet S, Richard T, Krisa S, Boussaid M, Boulila A 94: 505-513. BMP
2016 Taste-guided isolation of bitter lignans from Quercus petraea and their identification in wine. Sindt L, Gammacurta M, Waffo-Teguo P, Dubourdieu D, Marchal A (2016) 79: 2432-2438 BMP
2016 Fragile X Mental Retardation Protein (FMRP) controls diacylglycerol kinase activity in neurons. Tabet R, Moutin E, Becker JA, Heintz D, Fouillen L, Flatter E, Krezel W, Alunni V, Koebel P, Dembélé ... BMP doi: 10.1073/pnas.1522631113
2016 grain protein concentration is related to early post-flowering nitrate uptake under putative control of plant satiety level. Taulemesse F, Le Gouis J, Gouache D, Gibon Y, Allard V (2016) Bread wheat (Triticum aestivum L.) 11: e0149668. 10.1371/journal.pone.014966 BMP
2016 Piceatannol and other wine stilbenes: A pool of inhibitors against ?-synuclein aggregation and cytotoxicity. Temsamani H, Krisa S, Decossas-Mendoza M, Lambert O, Mérillon JM, Richard T 810.3390/nu8060367 BMP
2016 Enrichment of hydroxylated C24- and C26-acyl-chain sphingolipids mediates PIN2 apical sorting at trans-Golgi network subdomains. Wattelet-Boyer V, Brocard L, Jonsson K, Esnay N, Joubès J, Domergue F, Mongrand S, Raikhel N, Bhalerao ... 7: 12788. 10.1038/ncomms12788 BMP
2016 Quantification of 4-hydroxy-2-nonenal-protein adducts in the in vivo gastric digesta of mini-pigs using a GC-MS/MS method with accuracy profile validation Delosiere M, Sante-Lhoutellier V, Chantelauze C, Durand D, Thomas A, Joly C, Pujos-Guillot E, Remond ... 7(8):3497-3504. PFEM
2016 Feature Selection Methods for Early Predictive Biomarker Discovery Using Untargeted Metabolomic Data Grissa D, Pétéra M, Brandolini M, Napoli A, Comte B, Pujos-Guillot E 3(30):15 PFEM
2016 Repeated cures with paracetamol worsen sarcopenia in old rats with suboptimal food intake. Mast C, Savary-Auzeloux I, Remond D, Pouyet C, Centeno D, Voyard G, Combaret L, Dardevet D, Papet I. ... 67(5):759-768 PFEM
2016 Change in B and E vitamin and lutein, beta-sitosterol contents in industrial milling fractions and during toasted bread production. Nurit E, Lyan B, Pujos-Guillot E, Branlard G, Piquet A. 69:290-296. PFEM
2016 N-3PUFA differentially modulate palmitate-induced lipotoxicity through alterations of its metabolism in C2C12 muscle cells. Pinel A, Rigaudiere JP, Laillet B, Pouyet C, Malpuech-Brugere C, Prip-Buus C, Morio B, Capel F. 1861(1):12-20. PFEM
2016 GPR40, a free fatty acid receptor, differentially impacts osteoblast behavior depending on differentiation stage and environment. Philippe, C., Wauquier, F., Lyan, B., Coxam, V., Wittrant, Y. (2016). 412 (1-2), 197-208. DOI : 10.1007/s11010-015-2626-5 PFEM
2016 Metabolic adaptations to HFHS overfeeding: how whole body and tissues postprandial metabolic flexibility adapt in Yucatan mini-pigs. Polakof S, Rémond D, Bernalier-Donadille A, Rambeau M, Pujos-Guillot E, Comte B, Dardevet D, Savary-Auzeloux ... PFEM
2016 Time Course of Molecular and Metabolic Events in the Development of Insulin Resistance in Fructose-Fed Rats. Polakof S, Dardevet D, Lyan B, Mosoni L, Gatineau E, Martin JF, Pujos-Guillot E, Mazur A, Comte B. 15(6):1862-1874 PFEM
2016 Red meat and colorectal cancer: Nrf2-dependent antioxidant response contributes to the resistance of preneoplastic colon cells to fecal water of hemoglobin- and beef-fed rats. Surya R, Helies-Toussaint C, Martin OC, Gauthier T, Gueraud F, Tache S, Naud N, Jouanin I, Chantelauze ... 37(6):635-645 PFEM
2016 Variations in the metabolome in response to disease activity of rheumatoid arthritis. Tatar Z, Migne C, Petera M, Gaudin P, Lequerre T, Marotte H, Tebib J, Pujos Guillot E, Soubrier M. 17(1):353 PFEM
2016 A Proof of Concept to Bridge the Gap between Mass Spectrometry Imaging, Protein Identification and Relative Quantitation: MSI similar to LC-MS/MS-LF. Théron L, Centeno D, Coudy-Gandilhon C, Pujos-Guillot E, Astruc T, Rémond D, Barthelemy JC, Roche F, ... 4(4). PFEM
2016 Fast-digestive protein supplement for ten days overcomes muscle anabolic resistance in healthy elderly men. Walrand S, Gryson C, Salles J, Giraudet C, Migne C, Bonhomme C, Le Ruyet P, Boirie Y. 35(3):660-668. PFEM
2016 Intestinal microbiota contributes to individual susceptibility to alcoholic liver disease. m. llopis, a.-m. cassard*, l. wrzosek, l. boschat, a. bruneau, g. ferrere, v. puchois, j.-c. martin, ... 65, 830-839. PFEM
2016 The impact of processing and aging on the oxidative potential, molecular structure and dissolution of gelatin. Anne Duconseille, Mounir Traikia, Marie Lagrée, Cyril Jousse, Guilhem Pagès, Philippe Gatellier, Thierry ... Volume 66, Pages 246-25 PFEM
2016 Intracerebral Synthesis of glutamine from hyperpolarized glutamate. Leslie Mazuel, Rolf F. Schulte, Aurélie Cladière, Claudine Spéziale, Marie Lagrée, Martin Leremboure, ... 42675 PFEM
2016 Clouds: a transient and stressing habitat for microorganisms. A.- M. Delort*, M. Vaïtilingom, M. Joly, P. Amato, N. Wirgot, A. LallemENT, M. Sancelme, M.Matulova, ... 2016 sous presse PFEM
2016 Oleate dose-dependently regulates palmitate metabolism and insulin signaling in C2C12 myotubes. Capel F, Cheraiti N, Acquaviva C, Hénique C, Bertrand-Michel J, Vianey-Saban C, Prip-Buus C, Morio B MetaToul 10.1016/j.bbalip.2016.10.002
2016 Glucocorticoid receptor-PPAR? axis in fetal mouse liver prepares neonates for milk lipid catabolism 4Rando G, Tan CK, Khaled N, Montagner A, Leuenberger N, Bertrand-Michel J, Paramalingam E, Guillou H, ... MetaToul 10.7554/eLife.11853
2016 Hepatic and serum lipid signatures specific to nonalcoholic steatohepatitis in murine models Chiappini F, Desterke C, Bertrand-Michel J, Guettier C, Le Naour F MetaToul 10.1038/srep31587
2016 Chlordecone Transfer and Distribution in Maize Shoots Pascal-Lorber S, Létondor C, Liber Y, Jamin E L, Laurent F 64:409-415 MetaToul 10.1021/acs.jafc.5b05115
2016 Hepatic circadian clock oscillators and nuclear receptors integrate microbiome-derived signals Montagner A, Korecka A, Polizzi A, Lippi Y, Blum Y, Canlet C, Tremblay-Franco M, Gautier-Stein A, Burcelin ... 6:20127 MetaToul 10.1038/srep20127
2016 Red Meat and Colorectal Cancer:Nrf2-Dependent Antioxidant Response Contributes to the Resistance of Preneoplastic Colon Cells to Faecal Water of Haemoglobin- and Beef-Fed Rats Surya R, Héliès-Toussaint C, Martin O, Gauthier T, Guéraud F, Taché S, Naud N, Jouanin I, Chantelauze ... 37:635-645 MetaToul 10.1093/carcin/bgw035
2016 Isocitrate dehydrogenase 1 mutations prime the all-trans retinoic acid myeloid differentiation pathway in acute myeloid leukemia Boutzen H, Saland E, Larrue C, de Toni F, Gales L, Castelli F A, Cathebas M, Zaghdoudi S, Stuani L, ... 213:483-497 MetaToul 10.1084/jem.20150736
2016 Chemical Composition, Antioxidant and Cytotoxic Activities of Roots and Fruits of Berberis libanotica El Hosry L, Boyer L, Garayev E E, Mabrouki F, Bun S-S, Debrauwer L, Auezova L, Cheble E, Elias R 11:645 - 648 MetaToul
2016 A consolidated method for screening the endocrine activity of drinking water Chevolleau S, Debrauwer L, Stroheker T, Viglino L, Mourahib I, Meireles M-H, Grimaldi M, Balaguer P, ... 213:274-283 MetaToul 10.1016/j.foodchem.2016.06.089
2016 Relation between crust development and heterocyclic aromatic amine formation when air-roasting a meat cylinder Kondjoyan A, Chevolleau S, Portanguen S, Molina J, Ikonic P, Clerjon S, Debrauwer L 213:641-646 MetaToul 10.1016/j.foodchem.2016.06.118
2016 Bisphenol A Exposure Disrupts Neurotransmitters Through Modulation of Transaminase Activity in the Brain of Rodents Zalko D, Soto A, Canlet C, Tremblay Franco M, Jourdan F, Cabaton N 157:1736-1739 MetaToul 10.1210/en.2016-1207
2016 Characterization of the contribution of buccal absorption to internal exposure to bisphenol A through the diet Guignard D, Gauderat G, Gayrard V, Lacroix M, Picard-Hagen N, Puel S, Toutain P-L, Viguie C 93:82-8 MetaToul 10.1016/j.fct.2016.04.004
2016 Bisphenol A glucuronide deconjugation is a determining factor of fetal exposure to bisphenol A Gauderat G, Picard-Hagen N, Toutain P-L, Corbel T, Viguie C, Puel S, Lacroix M, Mindeguia P, Bousquet-Mélou ... 86:52-9 MetaToul 10.1016/j.envint.2015.10.006
2016 Time Course of Molecular and Metabolic Events in the Development of Insulin Resistance in Fructose-Fed Rats Polakof Requejo S, Dardevet D, Lyan B, Mosoni L, Gatineau E, Martin J-F, Pujos-Guillot E, Mazur A, Comte ... 15:1862-1874 MetaToul 10.1021/acs.jproteome.6b00043
2016 Metabolomics as a tool for the authentication of rose extracts used in flavour and fragrance area Saint-Lary L, Roy C, Paris J-P, Martin J-F, Thomas O P, Fernandez X 0.534027777778 MetaToul 10.1007/s11306-016-0963-3
2016 Production of four macrocyclic trichothecenes by Stachybotrys chartarum during its development on different building materials as measured by UPLC-MS/MS Aleksic B, Bailly S, Draghi M, Pestka JJ, Oswald IP, Robine E, Bailly JD, Lacroix MZ 106:265-273 MetaToul 10.1016/j.buildenv.2016.07.002
2016 Standard PK/PD concepts can be applied to determine a dosage regimen for a macrolide: the case of tulathromycin in the calf Toutain P-L, Potter T, Pelligand L, Lacroix M, Illambas J, Lees P MetaToul doi: 10.1111/jvp.12333
2016 Bisphenol A in culture media and plastic consumables used for ART Gatimel N, Lacroix MZ, Chanthavisouk S, Picard-Hagen N, Gayrard V, Parinaud J, Léandri RD 31:1436-1444 MetaToul doi: 10.1093/humrep/dew116
2016 An efficient data filtering strategy for easy metabolite detection from the direct analysis of a biological fluid using Fourier transform mass spectrometry Rathahao-Paris E, Alves S, Debrauwer L, Cravedi J-P, Paris A accepté MetaToul 10.1002/rcm.7812
2016 Intestinal PPARg signalling is required for sympathetic nervous system activation in response to caloric restriction Duszka K, Picard A, Ellero-Simatos E, Chen J, Defernez M, Paramalingam E, Pigram A, Vanoaica, Canlet ... 6:36937 MetaToul doi:10.1038/srep36937
2016 In vitro Degradation of Antimicrobials during Use of Broth Microdilution Method Can Increase the Measured Minimal Inhibitory and Minimal Bactericidal Concentrations Lallemand EA, Lacroix MZ, Toutain PL, Boullier S, Ferran AA, Bousquet-Melou A 7:2051 MetaToul doi:  10.3389/fmicb.2016.02051
2016 Isocitrate dehydrogenase 1 mutations prime the all-trans retinoic acid myeloid differentiation pathway in acute myeloid leukemia Héléna Boutzen, Estelle Saland, Clément Larrue, Fabienne de Toni, Lara Gales, Florence A. Castelli, ... 213:483-497 MetaToul doi : 10.1084/jem.20150736
2016 Comprehensive Analysis of Parasite Biology: From Metabolism to Drug Discovery: From Metabolism to Drug Discovery: 13. Methods to Investigate Metabolic Systems in Trypanosoma Maria Fatarova, Florian Bellvert, Edern Cahoreau, Frédéric Bringaud, Jean-Charles Portais MetaToul DOI: 10.1002/9783527694082.ch13
2016 Recent advances in high-throughput 13C-fluxomics Stéphanie Heux, Cécilia Bergès, Pierre Millard, Jean-Charles Portais and Fabien Létisse 43:104-109 MetaToul
2016 Multilevel interaction of the DnaK/DnaJ(HSP70/HSP40) stress-responsive chaperone machine with the central metabolism Fréderic Anglès, Marie-Pierre Castanié-Cornet, Nawel Slama, Mickael Dinclaux, Anne-Marie Cirinesi, Jean-Charles ... 41341 MetaToul doi:10.1038/srep41341
2016 Acetate fluxes in Escherichia coli are determined by the thermodynamic control of the Pta-AckA pathway Brice Enjalbert, Pierre Millard, Mickael Dinclaux, Jean-Charles Portais & Fabien Létisse 42135 MetaToul doi:10.1038/srep42135
2016 Computational methods to identify metabolic sub-networks based on metabolomic profile Frainay C., Jourdan F MetaToul
2016 biosigner: a new method for the discovery of significant molecular signatures from omics data Rinaudo P, Boudah S, Junot C, Thevenot E.A. MetabolomeIDF
2016 Annotation of the human cerebrospinal fluid lipidome using high resolution mass spectrometry and a dedicated data processing workflow A. Seyer, S Boudah, S Broudin, C Junot, B Colsch 12: 91 MetabolomeIDF DOI: 10.1007/s11306-016-1023-8
2016 Development and validation of a multiresidue method for the analysis of more than 500 pesticides and drugs in water based on on-line and liquid chromatography coupled to high resolution mass spectrometry. Cotton J, Leroux F, Broudin S, Poirel M, Corman B, Junot C, Ducruix C. 104: 20-27 MetabolomeIDF doi: 10.1016/j.watres.2016.07.075
2016 Cerebrospinal fluid metabolomics highlights dysregulation of energy metabolism in overt hepatic encephalopathy. Weiss N, Barbier Saint Hilaire P, Colsch B, Isnard F, Attala S, Schaefer A, Amador MdM, Rudler M, Lamari ... 65(6):1120-1130 MetabolomeIDF doi: 10.1016/j.jhep.2016.07.046
2016 Mechanistic study of competitive releases of H2O, NH3 and CO2 from deprotonated aspartic and glutamic acids: Role of conformation. Barbier Saint Hilaire P, Warnet A, Gimbert Y, Hohenester UM, Giorgi G, Olivier MF, Fenaille F, Colsch ... S1570-0232(16)30681 MetabolomeIDF  doi: 10.1016/j.jchromb.2016.08.036
2016 Annual Conference of the National Infrastructures for Biobanking Doucet M, Becker KF, Björkman J, Bonnet J, Clément B, Daidone MG, Duyckaerts C, Erb G, Haslacher H, ... MetabolomeIDF doi: 10.1089/bio.2016.0053.
2016 Bio-engineered and native red blood cells from cord blood exhibit the same metabolomic profile. Darghouth D, Giarratana MC, Oliveira L, Jolly S, Marie T, Boudah S, Mario N, Junot C, Douay L, Romeo ... 101 (6) MetabolomeIDF doi: 10.3324/haematol.2015.141465
2016 Isocitrate dehydrogenase 1 mutations prime the all-trans retinoic acid myeloid differentiation pathway in acute myeloid leukemia. Boutzen H, Saland E, Larrue C, de Toni F, Gales L, Castelli FA, Cathebas M, Zaghdoudi S, Stuani L, Kaoma ... 213 (4) MetabolomeIDF doi: 10.1084/jem.20150736
2016 Hepatic versus drug-induced encephalopathy in cirrhotic patients? Weiss N, Junot C, Rudler M, Thabut D. 36 (8) MetabolomeIDF doi: 10.1111/liv.13061.
2016 The Time Is Right to Focus on Model Organism Metabolomes. Edison AS, Hall RD, Junot C, Karp PD, Kurland IJ, Mistrik R, Reed LK, Saito K, Salek RM, Steinbeck C, ... 6 (1) MetabolomeIDF doi: 10.3390/metabo6010008
2015 Computational methods to identify metabolic sub-networks based on metabolomic profile Frainay C., Jourdan F.

Briefings in Bioinformatics. In press

BMP 51: 272-299
2015 Chronic Intake of Sucrose Accelerates Sarcopenia in Older Male Rats through Alterations in Insulin Sensitivity and Muscle Protein Synthesis. Gatineau E, Savary-Auzeloux I, Migné C, Polakof S, Dardevet D and Mosoni L

Journal of Nutrition

BMP 145(5):923-930. (IF:4.227 Nutrition & Dietetics 11/79-Q1) doi: 10.3945/jn.
Epub 2015 Mar 25.
2015 Development of a LC-MS/MS method for the simultaneous screening of seven water-soluble vitamins in processing semi-coarse wheat flour products. Nurit E, Lyan B, Piquet A, Branlard G and Pujos-Guillot E Analytical and Bioanalytical Chemistry PMC 407(12):3471-3479. (IF:3.578 Biochemical Research Methods 21/78-Q2) doi: 10.1007/s00216-015-8553-1. Epub 2015 Feb 21.
2015 Assessment of protein modifications in liver of rats under chronic treatment with paracetamol (acetaminophen) using two complementary mass spectrometry-based metabolomic approaches. Mast C, Lyan B, Joly C, Centeno D, Giacomoni F, Martin J-F, Mosoni L, Dardevet D, Pujos-Guillot E and ... Journal of Proteomics PMC 120:194-203. (IF:3.929 Biochemical Research Methods 16/78-Q1) doi: 10.1016/j.jprot.2015.03.014. Epub 2015 Mar 24.
2015 Methyl donor deficiency in H9c2 cardiomyoblasts induces ER stress as an important part of the proteome response. Martinez E, Deval C, Jousse C, Mazur A, Brachet P and Comte B The International Journal of Biochemistry & Cell Biology PMC 59:62-72. (IF:4.240 Biochemistry & Molecular Biology 75/291-Q2) doi: 10.1016/j.biocel.2014.11.013. Epub 2014 Dec 6
2015 Skeletal muscle lipid content and oxidative activity in relation to muscle fiber type in aging and metabolic syndrome. Gueugneau M, Coudy-Gandilhon C, Theron L, Meunier B, Barboiron C, Combaret L, Taillandier D, Polge C, ... The journals of gerontology Series A, Biological sciences and medical sciences. PMC 70(5):566-576. (IF:4.984 Geriatrics & Gerontology 3/49-Q1) doi: 10.1093/gerona/glu086. Epub 2014 Jun 17
2015 Chronic Intake of Sucrose Accelerates Sarcopenia in Older Male Rats through Alterations in Insulin Sensitivity and Muscle Protein Synthesis. Gatineau E, Savary-Auzeloux I, Migné C, Polakof S, Dardevet D and Mosoni L Journal of Nutrition PMC 145(5):923-930. (IF:4.227 Nutrition & Dietetics 11/79-Q1) doi: 10.3945/jn.114.205583. Epub 2015 Mar 25.
2015 Cyclic Fatty Acids Found in Frying Oils are Detoxified via Classical Drug Metabolic Pathway but also by beta-Oxidation and Eliminated as Conjugates in Rats. Desmarais A, Pujos-Guillot E, Lyan B, Martin JF, Leblanc N, Angers P and Sebedio JL Lipids PMC 50(4):381-396. (IF:2.353 Nutrition & Dietetics 42 of 79-Q3) doi: 10.1007/s11745-015-3997-9. Epub 2015 Mar 5.
2015 Slight chronic elevation of C-reactive protein is associated with lower aerobic fitness but does not impair meal-induced stimulation of muscle protein metabolism in healthy old men. Buffiere C, Mariotti F, Savary-Auzeloux I, Migne C, Meunier N, Hercberg S, Cano N, Remond D, Duclos ... Journal of Physiology-London PMC 593(5):1259-1272. (IF:4.544 PHYSIOLOGY 8 of 81 Q1) doi: 10.1113/jphysiol.2014.286054. Epub 2015 Feb 4.
2015 Postprandial metabolic events in mini-pigs: new insights from a combined approach using plasma metabolomics, tissue gene expression, and enzyme activity Polakof Requejo Sergio 47 ; Remond Didier 47 ; Rambeau Mathieu 47 ; Pujos-Guillot Estelle 47 ; Sébédio ... Metabolomics PMC
2015 Non-enzymatic cyclic oxygenated metabolites of adrenic, docosahexaenoic, eicosapentaenoic and alpha-linolenic acids; bioactivities and potential use as biomarkers Galano Jean-Marie ; Lee Jetty C. ; Gladine Cécile 47 ; Comte Blandine 47 ; Le Guennec Jean-Yves ... Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids PMC
2015 Contribution of the multiple Type I signal peptidases to the secretome of Listeria monocytogenes: Deciphering their specificity for secreted exoproteins by exoproteomic analysis Renier Sandra ; Chafsey Ingrid 19 ; Chambon Christophe 52 ; Caccia Nelly 19 ; Charbit Alain ; Hébraud ... Journal of Proteomics PMC
2015 Presence of mycotoxins in sugar beet pulp silage collected in France Boudra H. 17 ; Rouillé Benoît ; Lyan Bernard 47 ; Morgavi Diego 17 Animal Feed Science and Technology PMC
2015 Can we Trust Untargeted Metabolomics: Results of the Metabo-ring Initiative, a Large-scale Multi-instruments Inter-laboratoire Study Martin Jean-Charles 47 ; Maillot Mathieu 47 ; Mazerolles Gerard ; Verdu Alexandre ; Lyan Bernard 47 ... Metabolomics PMC
2015 Metabolomics reveals differential metabolic adjustments of normal and overweight subjects during overfeeding Morio Beatrice ; Comte Blandine 47 ; MARTIN Jean-François ; Chanseaume Emilie 47 ; Alligier Maud ... Metabolomics PMC
2015 Quantification of peptides released during in vitro digestion of cooked meat. Sayd T, Chambon C, Sante-Lhoutellier J. Food Chem PMC
2015 Changes in the nuclear proteome of developing wheat (Triticum aestivum L.) grain Bonnot T, Bancel E, Chambon C, Boudet J, Branlard G, Martre P. Front. Plant Sci., PMC
2015 Surfaceome and exoproteome of a clinical sequence type 398 methicillin resistant Staphylococcus aureus strain. - Monteiro, R, Hébraud, M, Chafsey, I, Chambon, C, Viala, D, Torres, C, Poeta, P and Igrejas Biochem. Biophys. Reports, PMC
2015 Effect of vancomycin on the proteome of the multiresistant Enterococcus faecium SU18 strain Ramos, S, Chafsey, I, Silva, N, Hébraud, M, Santos, H, Capelo-Martinez, J-L, Poeta, P, and Igrejas, ... J. Proteomics, PMC
2015 A new phosphorylated form of Ku70 identified in resistant leukemic cells confers fast but unfaithful DNA repair in cancer cell lines. Bouley J, Saad L, Grall R, Schellenbauer A, Biard D, Paget V, Morel-Altmeyer S, Guipaud O, Chambon C, ... Oncotarget, PMC
2015 Proteome evolution of wheat (Triticum aestivum L.) aleurone layer at fifteen stages of grain development. Nadaud I, Tasleem-Tahir A, Chateigner-Boutin AL, Chambon C, Viala D, Branlard G. J. Proteomics. PMC
2015 Contribution of the multiple Type I signal peptidases to the secretome of Listeria monocytogenes: deciphering their specificity for secreted exoproteins by exoproteomic analysis. Renier S, Chafsey I, Chambon C, Caccia N, Charbit A, Hébraud M, Desvaux M. J. Proteomics, PMC
2015 Intestinal microbiota contributes to individual susceptibility to alcoholic liver disease Llopis M., Cassard A.-M., Wrzosek L., Boschat L., Bruneau A., Ferrere G., Puchois V., Martin J.-C., ... Gut PMC doi:10.1136/gutjnl-2015-310585
2015 Co-occurrence of microcystin and anatoxin-a in the freshwater lake Aydat (France): Analytical and molecular approaches during a three-year survey Sabart M., Crenn K., Perrière F., Abila A., Leremboure M., Colombet J., Jousse C., Latour D. Harmful Algae PMC doi:10.1016/j.hal.2015.06.007
2015 Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome. Shoaie S, Ghaffari P, Kovatcheva-Datchary P, Mardinoglu A, Sen P, Pujos-Guillot E, de Wouters T, Juste ... Cell Metabolism PMC 22 (2):320-331 doi: 10.1016/j.cmet.2015.07.001.
2015 Twin peaks : Searching for 4-hydroxynonenal urinary metabolites after oral administration in rats Keller J, Baradat M, Jouanin I, Debrauwer L, Guéraud F Redox Biol MetaToul 4 : 136-148 10.1016/j.redox.2014.12.016
2015 Workflow4Metabolomics A collaborative research infrastructure for computational metabolomics. Giacomoni F, Le Corguillé G, Monsoor M, Landi M, Pericard P, Pétéra M, Duperier C, Tremblay-Franco M, ... Bioinformatics BMP, MetabolomeIDF, PFEM, MetaToul 31 : 1493-1495 10.1093/bioinformatics/btu813
2015 A central role for heme iron in colon carcinogenesis associated with red meat intake Bastide N, Chenni F, Audebert M, Santarelli R, Taché S, Naud N, Baradat M, Jouanin I, Surya R, Hobbs ... Cancer Res MetaToul 75 : 870-879 10.1158/0008-5472.CAN-14-2554
2015 Cell-Specific Biotransformation of Benzophenone-2 and Bisphenol-S in Zebrafish and Human in Vitro Models Used for Toxicity and Estrogenicity Screening Le Fol V, Aït-Aïssa S, Cabaton N, Dolo L, Grimaldi M, Balaguer P, Perdu E, Debrauwer L, Brion F, Zalko ... Environ Sci Technol MetaToul 49 : 3860-3868 10.1021/es505302c
2015 Assessment of comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry based methods for investigating 206 dioxin-like micropollutants in animal-derived food matrices Planche C, Ratel J, Mercier F, Blinet P, Debrauwer L, Engel E J Chromatogr A MetaToul 1392 : 74-81 10.1016/j.chroma.2015.02.054
2015 Facile oxime ether synthesis : free carbonyl compounds derivatization by a brominated O-benzylhydroxylamine Jouanin I, Chevolleau S, Canlet C, Lorber C, Pierre F, Guéraud F, Debrauwer L Synth Commun MetaToul 45 : 1585-1591 10.1080/00397911.2015.1035791
2015 Influence of intraspecific variability and abiotic factors on mycotoxin production in Penicillium roqueforti Fontaine K,Hymery N,Lacroix MZ, Puel S, Puel O, Rigalma K, Gaydou V, Coton E, Mounier J Int J Food Microbiol MetaToul 10.1016/j.ijfoodmicro.2015.07.021
2015 Allometric scaling for predicting human clearance of bisphenol A Collet SH, Picard-Hagen N, Lacroix MZ, Puel S, Viguié C, Bousquet-Melou A,Toutain PL, Gayrard V Toxicol Applied Pharmacol MetaToul 284 : 323-29 10.1016/j.taap.2015.02.024
2015 Conjugation and Deconjugation Reactions within the Fetoplacental Compartment in a Sheep Model: A Key Factor Determining Bisphenol A Fetal Exposure Corbel T, Perdu E, Gayrard V, Puel S, Lacroix MZ, Viguié C, Toutain PL, Zalko D, Picard-Hagen N Drug Metab Dispos MetaToul 43 : 463-76 10.1124/dmd.114.061291
2015 Pharmacokinetic/pharmacodynamic integration and modelling of amoxicillin for the calf pathogens Mannheimia haemolytica and Pasteurella multocida Lees P,Pelligand L, Illambas J, Potter T, Lacroix M, Rycroft A, Toutain P-L J Vet Pharmacol Ther MetaToul 10.1111/jvp.12207
2015 Can we trust untargeted metabolomics? Results of the metabo-ring initiative, a large-scale, multi-instrument inter-laboratory study Martin J-C, Maillot M, Mazerolles G, Verdu A, Lyan B, Migné C, Defoort C, Canlet C, Junot C, Guillou ... Metabolomics MetaToul 11 : 807-821 10.1007/s11306-014-0740-0
2015 Metabolomics reveals differential metabolic adjustments of normal and overweight subjects during overfeeding Morio B, Comte B, Martin J-F, Chanseaume E, Alligier M, Junot C, Lyan B, Boirie Y, Vidal H, Laville ... Metabolomics MetaToul 11 : 920-938 10.1007/s11306-014-0750-y
2015 Multi-omics profiling reveals that eating difficulties developed consecutively to artificial nutrition in the neonatal period are associated to specific saliva composition Morzel M, Neyraud E, Brignot H, Ducoroy P, Jeannin A, Lucchi G, Truntzer C, Canlet C, Tremblay-Franco ... J Proteomics MetaToul 128 : 105-112 10.1016/j.jprot.2015.07.028
2015 Cyclic Fatty Acids Found in Frying Oils are Detoxified via Classical Drug Metabolic Pathway but also by ?-Oxidation and Eliminated as Conjugates in Rats Desmarais A, Pujos-Guillot E,Lyan B, Martin J-F, Leblanc N., Angers P,Sébédio J-L Lipids MetaToul 50 : 381-396 10.1007/s11745-015-3997-9
2015 Assessment of protein modifications in liver of rats under chronic treatment with paracetamol (acetaminophen) using two complementary mass spectrometry-based metabolomic approaches Mast C, Lyan B, Joly C, Centeno D, Giacomoni F, Martin J-F, Mosoni L., Dardevet D, Pujos-Guillot E, ... J Proteomics MetaToul 120 : 194-203 doi:10.1016/j.jprot.2015.03.014
2015 Protective effects of n-6 fatty acids-enriched diet on intestinal ischemia/reperfusion injury involve lipoxin A4 and its receptor. Gobbetti T, Ducheix S, le Faouder P, Perez T, Riols F, Boue J, Bertrand-Michel J, Dubourdeau M, Guillou ... Br J Pharmacol MetaToul 172(3) : 910-923 doi: 10.1111/bph.12957.// PMID:25296998
2015 A novel jaspine B-ceramide hybrid modulates sphingolipid metabolism Garcia, V. , Le Faouder, P. , Dupuy, A. , Levade, T. , Ballereau, S. , Génisson, Y. Chemistry & Biodiversity MetaToul doi: 10.1002/cbdv.201400357
2015 Novel role for ChREBP in the control of ethanol metabolism and susceptibility to binge drinking. Marmier S, Dentin R, Daujat-Chavanieu M, Guillou H, Bertrand-Michel J, Gerbal-Chaloin S, Girard J, Lotersztajn ... Hepatology MetaToul doi: 10.1002/hep.27778//PMID:25761756
2015 Quantification and Potential Functions of Endogenous Agonists of Transient Receptor Potential Channels in Patients With Irritable Bowel Syndrome. Cenac N, Bautzova T, Le Faouder P, Veldhuis NA, Poole DP, Rolland C, Bertrand J, Liedtke W, Dubourdeau ... Gastroenterology MetaToul doi:10.1053/j.gastro.2015.04.011
2015 Specific Cellular Incorporation of a Pyrene-Labelled Cholesterol: Lipoprotein-Mediated Delivery toward Ordered Intracellular Membranes. Gaibelet G, Allart S, Tercé F, Azalbert V, Bertrand-Michel J, Hamdi S, Collet X, Orlowski S PloS One MetaToul doi: 10.1371/journal.pone.0121563 // PMID:25875769
2015 Cytomegalovirus Infection Triggers the Secretion of the PPAR? Agonists 15-Hydroxyeicosatetraenoic Acid (15-HETE) and 13-Hydroxyoctadecadienoic Acid (13-HODE) in Human Cytotrophoblasts and Placental Cultures. Leghmar K, Cenac N, Rolland M, Martin H, Rauwel B, Bertrand-Michel J, Le Faouder P, Bénard M, Casper ... PloS One MetaToul doi: 10.1371 /PMID:26171612
2015 Engineering Escherichia coli for methanol conversion Jonas E.N. Müller,Fabian Meyera, Boris Litsanova, Patrick Kiefera, Eva Potthoffa, Stéphanie Heux, Wim ... Metabolic Engeneering MetaToul 28 : 190-201 doi:10.1016/j.ymben.2014.12.008
2015 Acetate exposure determines the diauxic behavior of Escherichia coli during the glucose-acetate transition Brice Enjalbert, Muriel Cocaign-Bousquet, Jean-Charles Portais and Fabien Letisse Journal of Bacteriology MetaToul doi: 10.1128/JB.00128-15
2015 Production of carbon-13-labeled cadaverine by engineered Corynebacterium glutamicum using carbon-13-labeled methanol as co-substrate Lennart Leßmeier, Johannes Pfeifenschneider, Marc Carnicer, Stephanie Heux, Jean-Charles Portais, Volker F. ... Applied Microbiology and Biotechnology MetaToul DOI 10.1007/s00253-015-6906-5
2015 Metabolic footprint of epiphytic bacteria on Arabidopsis thaliana leaves Florian Ryffel, Eric JN Helfrich, Patrick Kiefer, Lindsay Peyriga, Jean-Charles Portais, Jörn Piel and ... The ISME Journal MetaToul doi:10.1038/ismej.2015.141
2015 Gluconeogenesis, an essential metabolic pathway for pathogenic Francisella Brissac T, Ziveri J, Ramond E, Tros F, Kock S, Dupuis M, Brillet M, Barel M, Peyriga L, Cahoreau E, ... Molecular Microbiology MetaToul doi: 10.1111/mmi.13139
2015 Carotenoid accumulation during tomato fruit ripening is modulated by the auxin-ethylene balance Liyan Su, Gianfranco Diretto, Eduardo Purgatto, Saïda Danoun, Mohamed Zouine,Zhengguo Li, Jean-Paul ... BMC Plant Biology MetaToul
2015 Computational solution to automatically map metabolite libraries in the context of genome scale metabolic networks Benjamin Merlet, Nils Paulhe, Florence Vinson, Clément Frainay, Nathalie Poupin, Yoann Gloaguen, Franck ... Frontiers in Molecular Biosciences, section Metabolomics. Edited by: Wolfram Weckwerth MetaToul
2015 Aminobisphosphonates synergize with HCMV to activate the antiviral activity of V?9V?2 2 cellsa Charline Daguzan, Morgane Moulin, Hanna Kulyk-Barbier , Christian Davrinch, Suzanne Peyrottes, Eric ... Journal of Immunology MetaToul
2015 Chlordecone Transfer and Distribution in Maize Shoots Pascal-Lorber S, Létondor C, Liber Y, Jamin E L, Laurent F J Agric Food Chem MetaToul 64 : 409-415
2015 Comment on "In Vitro Effects of Bisphenol A ?-D-Glucuronide (BPA-G) on Adipogenesis in Human and Murine Preadipocytes" Gayrard V, Gauderat G, Lacroix MZ, Viguié C, Bousquet-Melou A, Toutain PL, Hagen-Picard N Environ Health Perspect MetaToul 123 (12) : A289  doi:  10.1289/ehp.1510315
2015 Dynamic Metabolic Disruption in Rats Perinatally Exposed to Low Doses of Bisphenol-A Tremblay-Franco M, Cabaton N J, Canlet C, Gautier R, Schaeberle C M, Jourdan F, Sonnenschein C, Vinson ... PLoS ONE MetaToul 10 : e0141698
2015 Effect of obesity and metabolic syndrome on plasma oxysterols and fatty acids in human Tremblay-Franco M, Zerbinati C, Pacelli A, Palmaccio G, Lubrano C, Ducheix S, Guillou H, Iuliano L Steroids MetaToul 99, Part B : 287-292
2015 Impact of maternal obesity on the metabolic profiles of pregnant women and their offspring at birth Desert R, Canlet C, Costet N, Cordier S, Bonvallot N Metabolomics MetaToul 11 : 1896-1907
2015 Theoretical Basis for Dynamic Label Propagation in Stationary Metabolic Networks under Step and Periodic Inputs Sokol S, Portais J-C. PLOS ONE MetabolomeIDF 10(12)
2015 Lipidomic analysis of cerebrospinal fluid by mass spectrometry-based methods. Colsch B, Seyer A, Boudah S, Junot C. J Inherit Metab Dis. MetabolomeIDF 38(1):53-64
2015 Analysis of the human adult urinary metabolome variations with age, body mass index and gender by implementing a comprehensive workflow for univariate and OPLS statistical analyses. Thévenot E.A., Roux A., Xu Y., Ezan E. and Junot C. Journal of Proteome Research 14:3322-3335 MetabolomeIDF 14 (8), pp 3322-3335
2015 Maturation of nematode-induced galls in Medicago truncatula is related to water status and primary metabolism modifications. Baldacci-Cresp F, Maucourt M, Deborde C, Pierre O, Moing A, Brouquisse R, Favery B, Frendo P (2015) Plant Science 232: 77-85. BMP 232: 77-85. DOI: 10.1016/j.plantsci.2014.12.019
2015 Metabolomic profiling in tomato reveals diel compositional changes in fruit affected by source-sink relationships. Bénard C, Bernillon S, Biais B, Osorio S, Maucourt M, Ballias P, Deborde C, Colombié S, Cabasson C, ... Journal of Experimental Botany 11: 3391-3404 BMP 11: 3391-3404 doi: 10.1093/jxb/erv151
2015 Re-visiting plant plasma membrane lipids in tobacco: a focus on sphingolipids Cacas JL, Buré C, Grosjean K, Gerbeau-Pissot P, Lherminier J, Rombouts Y, Maes E, Bossard C, Gronnier ... Plant Physiology: in press BMP in press doi:
2015 Modelling central metabolic fluxes by constraint-based optimization reveals metabolic reprogramming of developing tomato fruit Colombié S, Nazaret, Bénard C, Biais B, Mengin V, Solé M, Fouillen L, Dieuaide-Noubhani M, Mazat J, ... The Plant  Journal 81: 24-39 BMP 81: 24-39 doi: 10.1111/tpj.12685
2015 Hyperpolarized NMR of plant and cancer cell extracts at natural abundance Dumez J, Milani J, Vuichoud B, Bornet AJP, Lalande-Martin J, Tea I, Yon M, Maucourt M, Deborde C, Moing ... Analyst 140: 5860-5863. BMP 140: 5860-5863. DOI: 10.1039/C5AN01203A
2015 Workflow4Metabolomics: A collaborative research infrastructure for computational metabolomics Giacomoni F, Le Corguillé G, Monsoor M, Landi M, Pericard P, Pétéra M, Duperier C, Tremblay-Franco M, ... Bioinformatics BMP 31: 1493-1495 10.1093/bioinformatics/btu813
2015 Aluminium stress disrupts metabolic performance of Plantago almogravensis plantlets transiently Grevenstuk T, Moing A, Maucourt M, Deborde C, Romano A (2015) Biometals 28: 997-1007 BMP 28: 997-1007 DOI 10.1007/s10534-015-9884-2
2015 Specific membrane lipid composition is important for plasmodesmata function in Arabidopsis Grison MS, Brocard L, Fouillen L, Nicolas W, Wewer V, Dormann P, Nacir H, Benitez-Alfonso Y, Claverol ... Plant Cell 27: 1228-1250 BMP 27: 1228-1250 DOI: 10.1105/tpc.114.135731
2015 Differential effect of plant lipids on membrane organization: hot features and specificities of phytosphingolipids and phytosterols Grosjean K, Mongrand S, Beney L, Simon-Plas F, Gerbeau-Pissot P Journal of Biological Chemistry 290: 5810-5825 BMP 290: 5810-5825 doi: 10.1074/jbc.M114.598805
2015 Involvement of the caleosin/peroxygenase RD20 in the control of cell death during Arabidopsis responses to pathogens. Hanano A, Bessoule JJ, Heitz T, Blee E (2015) Plant signaling & behavior 10: e991574  BMP 10: e991574  DOI: 10.4161/15592324.2014.991574
2015 CER2-LIKE proteins have unique biochemical and physiological functions in very-long-chain fatty acid elongation. Haslam TM, Haslam R, Thoraval D, Pascal S, Delude C, Domergue F, Manas-Fernandez A, Beaudoin F, Napier ... Plant Physiology 167: 682-692. BMP 167: 682-692. DOI:10.1104/pp.114.253195
2015 Flavonol profiles in berries of wild Vitis accessions using liquid chromatography coupled to mass spectrometry and nuclear magnetic resonance spectrometry. Hilbert G, Temsamani H, Bordenave L, Pedrot E, Chaher N, Cluzet S, Delaunay J-C, Ollat N, Delrot S, ... Food Chemistry 169: 49-58. BMP 169: 49-58. doi:10.1016/j.foodchem.2014.07.079
2015 Absolute quantification of metabolites in tomato fruit extracts by fast 2D NMR Jézéquel T, Deborde C, Maucourt M, Zhendre V, Moing A, Giraudeau P Metabolomics 11: 1231-1242 BMP 11: 1231-1242 DOI: 10.1007/s11306-015-0780-0
2015 A DEMETER-like DNA demethylase governs tomato fruit ripening Liu R, How-Kit A, Stammitti L, Teyssier E, Rolin D, Mortain-Bertrand A, Halle S, Liu M, Kong J, Wu C, ... Proceedings of the National Academy of Sciences BMP 112: 10804-10809 DOI: 10.1073/pnas.1503362112
2015 Contribution of oak lignans to wine taste: chemical identification, sensory characterization and quantification Marchal A, Cretin BN, Sindt L, Waffo-Téguo P, Dubourdieu D Tetrahedron 71: 3148-3156 BMP 71: 3148-3156
2015 Development of an analytical methodology using Fourier transform mass spectrometry to discover new structural analogs of wine natural sweeteners. Marchal A, Génin E, Waffo-Téguo P, Bibès A, Da Costa G, Mérillon J-M, Dubourdieu D (2015) Analytica Chimica Acta 853: 425-434. BMP 853: 425-434. DOI: 10.1016/j.aca.2014.10.039
2015 Characterization of detergent-insoluble membranes in pollen tubes of Nicotiana tabacum (L.) Moscatelli A, Gagliardi A, Maneta-Peyret L, Bini L, Stroppa N, Onelli E, Landi C, Scali M, Idilli A-I, ... Biology Open 4: 378-399 BMP 4: 378-399 doi: 10.1242/bio.201410249.
2015 New E-miyabenol isomer isolated from grapevine cane using centrifugal partition chromatography guided by mass spectrometry Papastamoulis Y, Bisson J, Temsamani H, Richard T, Marchal A, Mérillon J-M, Waffo-Téguo P Tetrahedron 71: 3138-3142 BMP 71: 3138-3142
2015 Non-structural carbohydrates in woody plants compared among laboratories Quentin AG, Pinkard EA, Ryan MG, Tissue DT, Baggett LS, Adams HD, Maillard P, Marchand J, Landhäusser ... Tree Physiology in press BMP in press DOI 10.1093/treephys/tpv073
2015 Antioxidant, cytoprotective, anti-inflammatory and anticancer activities of Pistacia lentiscus (Anacardiaceae) leaf and fruit extracts Remila S, Atmani-Kilani D, Delemasure S, Connat J-L, Azib L, Richard T, Atmani D European Journal of Integrative Medicine 7: 274-286 BMP 7: 274-286
2015 Metabolomics Society's International Affiliations. Roessner U, Rolin D, van Rijswijk M, Hall R, Hankemeier T, Simmons T (2015) Metabolomics 11: 501-502. BMP 11: 501-502. DOI: 10.1007/s11306-015-0800-0
2015 Complementation of seed maturation phenotypes by ectopic expression of ABSCISSIC ACID INSENSITIVE3, FUSCA3 and LEAFY COTYLEDON2 in Arabidopsis. Roscoe T, Guilleminot J, Bessoule JJ, Berger F, Devic M (2015) Plant and Cell Physiololy 56: 1215-1228. BMP 56: 1215-1228. doi: 10.1093/pcp/pcv049
2015 Tomato fruit quality improvement facing the functional genomics revolution Rolin D, Teyssier E, Hong Y, Gallusci P. Chapter 9 (Jan, 2015) In Applied Plant Genomics and Biotechnology (ISBN978-0-08-100068-7), eds P. Poltronieri and Y. Hong. Elsevier Ltd BMP ISBN978-0-08-100068-7
2015 Coordination of standards in metabolomics (COSMOS): facilitating integrated metabolomics data access. Salek RM, Neumann S, Schober D, Hummel J, Billiau K, Kopka J, Correa E, Reijmers T, Rosato A, Tenori ... Metabolomics 11: 1587-1597 BMP 11: 1587-1597 DOI: 10.1007/s11306-015-0810-y
2015 Gallotannins and Tannic Acid: First chemical syntheses and in vitro inhibitory activity on Alzheimer's amyloid ?-peptide aggregation Sylla T, Pouységu L, Da Costa G, Deffieux D, Monti J-P, Quideau S Angewandte Chemie International Edition 54: 8217-8221 BMP 54: 8217-8221 DOI: 10.1002/anie.201411606
2015 Suberin: biosynthesis, regulation, and polymer assembly of a protective extracellular barrier. Vishwanath SJ, Delude C, Domergue F, Rowland O (2015) Plant Cell Report 34: 573-586. BMP 34: 573-586. doi: 10.1007/s00299-014-1727-z
2015 Impact of collection conditions on the metabolite content of human urine samples as analyzed by liquid chromatography coupled to mass spectrometry and nuclear magnetic resonance spectroscopy Roux A., Thévenot E., Seguin F., Olivier M.-F. and Junot C. Metabolomics MetabolomeIDF 11, 1095-1105 doi:10.1007/s11306-014-0764-5
2015 Analysis of the human adult urinary metabolome variations with age, body mass index and gender by implementing a comprehensive workflow for univariate and OPLS statistical analyses. Thévenot E.A., Roux A., Xu Y., Ezan E. and Junot C. Journal of Proteome Research MetabolomeIDF 14, 3322-3335 doi:10.1021/acs.jproteome.5b00354
2015 Annotation of the Staphylococcus aureus Metabolome Using Liquid Chromatography Coupled to High-Resolution Mass Spectrometry and Application to the Study of Methicillin Resistance. Aros-Calt S, Muller BH, Boudah S, Ducruix C, Gervasi G, Junot C, Fenaille F. Journal of Proteome Research MetabolomeIDF 14:4863-75. doi: 10.1021/acs.jproteome.5b00697.
2014 Bioguided isolation, characterization and biotransformation by Fusarium verticillioides of maize kernel compounds that inhibit fumonisin production Atanasova-Penichon V, Bernillon S, Marchegay G, Lornac A, Pinson-Gadais L, Ponts N, Zehraoui E, Barreau ... Plant-Microbe Interactions BMP 26, 3224-3242
2014 Model-assisted analysis of sugar metabolism throughout tomato fruit development reveals enzyme and carrier properties in relation to vacuole expansion Beauvoit BP, Colombié S, Monier A, Andrieu MH, Biais B, Bénard C, Chéniclet C, Dieuaide-Noubhani M, ... The Plant Cell BMP
2014 The reductase activity of Arabidopsis caleosin RD20 mediates GA-dependent flowering time, abscisic acid sensitivity and tolerance to oxidative stress Blee E, Boachon B, Burcklen M, Le Guedard M, Hanano A, Heintz D, Ehlting J, Herrfurth C, Feussner I, ... Plant Physiology BMP
2014 Characterization of glycosyl inositol phosphoryl ceramides from plants and fungi by mass spectrometry Bure C, Cacas JL, Mongrand S, Schmitter JM Analytical and Bioanalytical Chemistry BMP
2014 Modelling central metabolic fluxes by constraint-based optimization reveals metabolic reprogramming of developing tomato fruit Colombié S, Nazaret, Bénard C, Biais B, Mengin V, Solé M, Fouillen L, Dieuaide-Noubhani M, Mazat J, ... The Plant Journal BMP TPJ-00580-02014.R00581
2014 The Bifunctional Protein TtFARAT from Tetrahymena thermophila Catalyzes the Formation of both Precursors Required to Initiate Ether Lipid Biosynthesis Dittrich-Domergue F, Joubes J, Moreau P, Lessire R, Stymne S, Domergue F J Biol Chem BMP 289: 21984-21994
2014 Phospholipid biosynthesis increases in RHD3-defective mutants Maneta-Peyret L, Lai YS, Stefano G, Fouillen L, Brandizzi F, Moreau P Plant Signal Behav BMP 9
2014 Can we trust untargeted metabolomics? Results of the metabo-ring initiative, a large-scale, multi-instrument inter-laboratory study Martin, J.-C., Maillot, M., Mazerolles, G. et al. Metabolomics MetaTOUL
2014 Sterols associated with small unilamellar vesicles (SUVs): Intrinsic mobility role for 1H NMR detection Mouret L, Da Costa G, Bondon A. Magnetic Resonance in Chemistry 52, 339-344
2014 The basic leucine zipper transcription factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 is an important transcriptional regulator of abscisic acid-dependent grape berry ripening processes Nicolas, P., Lecourieux, D., Kappel, C. Cluzet S, Cramer G, Delrot S, Lecourieux F. Plant Physiology BMP 164, 365-383
2014 Resveratrol derivatives: a pool of inhibitors against ?-synuclein aggregation and cytotoxicity in R. Gongeon Temsamani, H., Krisa, S., Decossas, M. et al. (Ed) Wine Active Compounds 2014: proceedings of the 3rd edition of the International Conference Series on Wine Active Compounds. Beaune (France), pp. 455-457 BMP
2014 Identification of Glyceollin Metabolites Derived from Conjugation with Glutathione and Glucuronic Acid in Male ZDSD Rats by Online Liquid Chromatography-Electrospray Ionization Tandem Mass Spectrometry S. S. Quadri, R. E. Stratford, S. M. Boue, R. B. Cole Journal of Agricultural and Food Chemistry MetabolomeIDF 62(12), 2692-2700.d
2014 Downregulation of ceramide synthase-6 during epithelial-to-mesenchymal transition reduces plasma membrane fluidity and cancer cell motility Edmond V, Dufour F, Poiroux G, Shoji K, Malleter M, Fouqué A, Tauzin S, Rimokh R, Sergent O, Penna A, ... Oncogene MetaTOUL doi: 10.1038/onc.2014.55 // PMID:24632610
2014 Non-enzymatic lipid oxidation products in biological systems: Assessment of the metabolites from polyunsaturated fatty acids Vigor C, Bertrand-Michel J, Pinot E, Oger C, Vercauteren J, Le Faouder P, Galano JM, Lee JC, Durand ... J Chromatogr B MetaTOUL 65-78. DOI:10.1016/j.jchromb.2014.04.042// PMID:24856297
2014 New insights into the organ-specific adverse effects of fumonisin B1: comparison between lung and liver Loiseau N, Polizzi A, Dupuy A, Therville N, Rakotonirainy M, Loy J, Viadere JL, Cossalter AM, Bailly ... Arch Toxicol MetaTOUL DOI 10.1007/s00204-014-1323-6// PMID:25155190
2014 Muscle ectopic fat deposition contributes to anabolic resistance in obese sarcopenic old rats through eIF2? activation. Tardif N, Salles J, Guillet C, Tordjman J, Reggio S, Landrier JF, Giraudet C, Patrac V, Bertrand-Michel ... Aging Cell MetaTOUL 1-11. DOI: 10.1111/acel.12263// PMID:25139155
2014 Non-redundant protective properties of FPR2/ALX in polymicrobial murine sepsis Thomas Gobbetti , Sina M Coldewey , Jianmin Chen , Simon McArthur , Pauline le Faouder , Nicolas Cenac ... PNAS MetaTOUL 18685-18690 doi: 10.1073/pnas.1410938111
2014 The omega 6-fatty acid, arachidonic acid, regulates the conversion of white to brite adipocyte through a prostaglandin/calcium mediated pathway Didier F. Pisani, Rayane A. Ghandour, Guillaume E. Beranger, Pauline Le Faouder, Jean-Claude Chambard, ... Molecular Metabolism MetaTOUL 834-847 doi: 10.1016
2014 Sampling of intracellular metabolites for stationary and non-stationary< sup> 13 C-metabolic flux analysis in Escherichia coli Pierre Millarda, b, c, Stéphane Massoua, b, c, Christoph Wittmannd, Jean-Charles Portaisa, b, c, Fabien ... Anal. Biochem MetaTOUL 38-49 10.1016/j.ab.2014.07.026
2014 Developmental stage dependent metabolic regulation during meiotic differentiation in budding yeast Thomas Walther123*, Fabien Létisse123, Lindsay Peyriga123, Ceren Alkim1, Yuchen Liu4, Aurélie Lardenois4, ... BMC Biology MetaTOUL ? 10.1186/s12915-014-0060-x
2014 A novel platform for automated high-throughput fluxome profiling of metabolic variants Stéphanie Heuxa, b, c, , , Juliette Poinota, b, c, Stéphane Massoua, b, c, Serguei Sokola, b, c, Jean-Charles ... Metabolic Eng. MetaTOUL 8 à 19 10.1016/j.ymben.2014.06.001
2014 Metabolomic study of fatty livers in ducks: Identification by 1H-NMR of metabolic markers associated with technological quality Bonnefont C M, Guerra A, Théron L, Molette C, Canlet C, Fernandez X Poultry Sci MetaTOUL 1542-1552 10.3382/ps.2013-03546
2014 Potential input from metabolomics for exploring and understanding the links between environment and health Bonvallot N, Tremblay-Franco M, Chevrier C, Canlet C, Debrauwer L, Cravedi J-P, Cordier S J Toxicol Environ Health, Part B: Crit Rev MetaTOUL 21-44 10.1080/10937404.2013.860318