2012

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Année Titre de la publication Auteurs Nom de la publication Site Référence Lien vers résumé
2012 Anthocyanin identification and composition of wild Vitis spp. accessions by using LC-MS and LC-NMR Acevedo de la Cruz A, Hilbert G, Rivière C, Mengin V, Ollat N, Bordenave L, Decrocq S, Delaunay JC, ... Analytica Chimica Acta BMP 732: 145-152 http://www.sciencedirect.com/science/article/pii/S000326701101628X
2012 Telling Stories: Enumerating maximal directed acyclic graphs with a constrained set of sources and targets Acuña V, Etienne Birmelé E, Cottret L, Crescenzi P, Jourdan F, Lacroix V, Marchetti-Spaccamela A, Marino ... Theoretical Computer Science MetaTOUL 457: 1-9 http://www.sciencedirect.com/science/article/pii/S0304397512007207
2012 Role of low-density lipoprotein receptor in the hepatitis C virus life cycle Albecka A, Belouzard S, Op de Beeck A, Descamps V, Goueslain L, Bertrand-Michel J, Tercé F, Duverlie ... Hepatology MetaTOUL 55(4):998-1007 http://www.ncbi.nlm.nih.gov/pubmed/22121002
2012 YPR139c/LOA1 encodes a novel lysophosphatidic acid acyltransferase associated with lipid droplets and involved in TAG homeostasis Ayciriex S, Le Guédard M, Camougrand N, Velours G, Schoene M, Wattelet-Boyer V, Dupuy J-W, Shevchenko ... Molecular Biology of the Cell BMP 23: 233-246 http://www.ncbi.nlm.nih.gov/pubmed/22090344
2012 (homo)glutathione deficiency impairs Meloidogine incognita development in Medicago truncatula Baldacci F, Chang C, Maucourt M, Deborde C, Hopkins J, Lecomte P, Bernillon S, Brouquisse R, Moing A, ... PLoS Pathogens BMP 8: e1002471 http://www.plospathogens.org/article/info%3Adoi%2F10.1371%2Fjournal.ppat.1002471
2012 Exosomal lipids impact notch signaling and induce death of human pancreatic tumoral SOJ-6 cells Beloribi S, Ristorcelli E, Breuzard G, Silvy F, Bertrand-Michel J, Beraud E, Verine A, Lombardo D Plos One MetaTOUL 7(10):e47480 http://www.ncbi.nlm.nih.gov/pubmed/?term=Exosomal+lipids+impact+notch+signaling+and+induce+death+of+human+pancreatic+tumoral+SOJ-6+cells
2012 The lipogenic transcription factor ChREBP dissociates hepatic steatosis from insulin resistance in mice and humans Benhamed F, Denechaud PD, Lemoine M, Robichon C, Moldes M, Bertrand-Michel J, Ratziu V, Serfaty L, Housset ... Journal of Clinical Investigation MetaTOUL 22(6):2176-94 http://www.ncbi.nlm.nih.gov/pubmed/?term=The+lipogenic+transcription+factor+ChREBP+dissociates+hepatic+steatosis+from+insulin+resistance+in+mice+and+humans
2012 Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis CER1 and CER3 are core components of a VLC-alkane synthesis complex Bernard A, Domergue F, Pascal S, Jetter R, Renne C, Faure JD, Haslam RP, Napier JA, Lessire R, Joubès ... The Plant Cell BMP 24: 1-13 http://www.plantcell.org/content/24/7/3106.full
2012 Precautions for harvest, sampling, storage and transport of crop plant metabolomics samples Biais B, Bernillon S, Deborde C, Cabasson C, Rolin D, Tadmor Y, Burger J, Schaffer AA, Moing A (2012) ... In N Hardy, R Hall, eds, Plant Metabolomics. Humana Press, Totowa, U.S.A. BMP 860: 51-63 http://www.ncbi.nlm.nih.gov/pubmed/22351170
2012 Electronic effects of 11? substituted 17?-estradiol derivatives and instrumental effects on the relative gas phase acidity. Bourgoin-Voillard S, Fournier F, Afonso C, Zins EL, Jacquot Y, Pèpe C, Leclercq G, Tabet JC. J Am Soc Mass Spectrom MetabolomeIDF 23(12):2167-77 http://link.springer.com/article/10.1007%2Fs13361-012-0486-8
2012 Lipids of plant membrane rafts Cacas JL, Furt F, Le Guédard M, Schmitter J, Buré C, Gerbeau-Pissot P, Moreau P, Bessoule J, Simon-Plas ... Progress in Lipid Research BMP 51: 272-299 http://www.ncbi.nlm.nih.gov/pubmed/22554527
2012 Rapid nanoscale quantitative analysis of plant sphingolipid long chain bases by GC-MS Cacas JL, Melser S, Domergue F, Joubès J, Bourdenx B, Schmitter JM, Mongrand S Analytical Bioanalytical Chemistry BMP 403: 2745-2755 http://www.ncbi.nlm.nih.gov/pubmed/22576656
2012 Isotopic profiling of ¹³C-labeled biological samples by two-dimensional heteronuclear J-resolved nuclear magnetic resonance spectroscopy. Cahoreau E, Peyriga L, Hubert J, Bringaud F, Massou S, Portais JC. Analytical Biochemistry MetaTOUL 427(2):158-63 http://www.ncbi.nlm.nih.gov/pubmed/22658961
2012 A genomics and multi-platform metabolomics approach to identify new traits of rice quality in traditional and improved varieties Calingacion MN, Boualaphanh C, Daygon VD, Anacleto R, Sackville Hamilton R, Biais B, Deborde C, Maucourt ... Metabolomics BMP 8: 771-783 http://link.springer.com/article/10.1007/s11306-011-0374-4
2012 NMR metabolomic approaches for plants, toxicology and medicine Canlet C, Shintu L, Elena-Herrmann B Actualité Chimique MetaTOUL 364: 59-68 http://WOS:000307795900014
2012 Characterization of maternal and fetal bisphenol A disposition in a physiologically-based sheep model Corbel T, Gayrard V, Viguie C, Puel S, Lacroix M Z, Toutain P L, Hagen-Picard N Journal of Veterinary Pharmacology and Therapeutics MetaTOUL 35: 64 http://WOS:000310251900098
2012 Occurrence, biosynthesis and functions of N-acylphosphatidylethanolamines (NAPE): Not just precursors of N-acylethanolamines (NAE) Coulon D, Faure L, Salmon M, Wattelet V, Bessoule JJ Biochimie BMP 94: 75-85 http://www.ncbi.nlm.nih.gov/pubmed/21575672
2012 N-Acylethanolamines and related compounds: aspects of metabolism and functions Coulon DF, Salmon M, Wattelet V, Bessoule J Plant Science BMP 184: 129-140 http://www.ncbi.nlm.nih.gov/pubmed/22284717
2012 Elucidation by NMR solution of neurotensin in Small Unilamellar Vesicle environment: molecular surveys for neurotensin receptor recognition Da Costa G, Bondon A, Delalande O, Mouret L, Monti JP Journal of Biomolecular Structure and Dynamics BMP 31: 809-817 http://www.ncbi.nlm.nih.gov/pubmed/22928939
2012 Exploring plant primary metabolism with MeRy-B a metabolomic database and knowledge base dedicated to plant Deborde C, Jacob D (2012) Exploring plant primary metabolism with MeRy-B a metabolomic database and ... In G Sriram, ed, Plant Metabolism: Methods and Protocols. Series: Methods in Molecular Biology, Vol. 1083 Humana Press BMP http://www.springer.com/life+sciences/plant+sciences/book/978-1-62703-660-3
2012 Arabidopsis wat1 (walls are thin1)-mediated resistance to the bacterial vascular pathogen, Ralstonia solanacearum, is accompanied by cross-regulation of salicylic acid and tryptophan metabolism. Denancé N, Ranocha P, Oria N, Barlet X, Rivière MP, Yadeta KA, Hoffmann L, Perreau F, Clément G, Maia-Grondard ... Plant Journal MetaTOUL 15. doi: 10.1111/tpj.12027.  http://dx.doi.org/10.1111/tpj.12027
2012 A systems biology approach to the hepatic role of the oxysterol receptor LXR in the regulation of lipogenesis highlights a cross-talk with PPAR?Biochimie Ducheix S, Podechard N, Lasserre F, Polizzi A, Pommier A, Murzilli S, Di Lisio C, D'Amore S, Bertrand-Michel ... Biochimie MetaTOUL 95(3):556-67 http://www.ncbi.nlm.nih.gov/pubmed/?term=A+systems+biology+approach+to+the+hepatic+role+of+the+oxysterol+receptor+LXR+in+the+regulation+of+lipogenesis+highlights+a+cross-talk+with+PPAR%CE%B1Biochimie
2012 Isorhapontigenin: a novel bioactive stilbene from wine grapes Fernández-Marín MI, Guerrero RF, García-Parrilla MC, Puertas B, Richard T, Rodriguez-Werner MA, Winterhalter ... Food Chemistry BMP 135: 1353-1359 http://www.ncbi.nlm.nih.gov/pubmed/22953865
2012 Parallel Biotransformation of Tetrabromobisphenol A in Xenopus laevis and Mammals: Xenopus as a Model for Endocrine Perturbation Studies Fini J-B, Riu A, Debrauwer L, Hillenweck A, Le Mével S, Chevolleau S, Boulahtouf A, Palmier K, Balaguer ... Toxicological Sciences MetaTOUL 125(2): 359-367 http://toxsci.oxfordjournals.org/content/125/2/359
2012 Trypacidin, a Spore-Borne Toxin from Aspergillus fumigatus, Is Cytotoxic to Lung Cells Gauthier T, Wang X, Sifuentes Dos Santos J, Fysikopoulos A, Tadrist S, Canlet C, Artigot M P, Loiseau ... PLoS ONE MetaTOUL 7(2): e29906 http://dx.doi.org/10.1371%2Fjournal.pone.0029906
2012 Lipid rafts Germain V, Perraki A, Mongrand S (2012) In Enclycopedia of Life Science BMP DOI: 10.1002/9780470015902.a0023727 http://www.els.net/WileyCDA/ElsArticle/refId-a0023727.html
2012 Flux analysis of the Trypanosoma brucei glycolysis based on a multi-objective criteria bioinformatic approach Ghozlane A, Bringaud F, Souedan H, Dutour I, Jourdan F, Thébault P Advances in Bioinformatics MetaTOUL 2012:159423 http://www.hindawi.com/journals/abi/2012/159423/
2012 Aspects of experimental design for plant metabolomics experiments and guidelines for growth of plant material Gibon Y, Rolin D n N Hardy, R Hall, eds, Plant Metabolomics. Humana Press, Totowa, U.S.A. BMP 860: 13-30 http://www.ncbi.nlm.nih.gov/pubmed/22351168
2012 New opportunities in metabolomics and biochemical phenotyping for plant systems biology Gibon Y, Rolin D, Deborde C, Bernillon S, Moing A In U Roessner, ed, Metabolomics. InTech BMP Jan-2029 http://www.intechopen.com/articles/show/title/new-opportunities-in-metabolomics-and-biochemical-phenotyping-for-plant-systems-biology
2012 UFJCOSY: a fast 3D NMR method for measuring isotopic enrichments in complex samples. Giraudeau P, Cahoreau E, Massou S, Pathan M, Portais JC, Akoka S. ChemPhysChem MetaTOUL 13(13):3098-101 http://www.ncbi.nlm.nih.gov/pubmed/22736503
2012 Cytotoxicity and genotoxicity of versicolorins and 5-methoxysterigmatocystin in A549 cells Jaksic D, Puel O, Canlet C, Kopjar N, Kosalec I, Klaric Maja S Archives of Toxicology MetaTOUL 86(10): 1583-1591 http://dx.doi.org/10.1007/s00204-012-0871-x
2012 Assessment of the genotoxicity of quinolone and fluoroquinolones contaminated soil with the Vicia faba micronucleus test Khadra A, Pinelli E, Lacroix M Z, Bousquet-Melou A, Hamdi H, Merlina G, Guiresse M, Hafidi M Ecotoxicology and Environmental Safety MetaTOUL 76: 187-192 http://www.sciencedirect.com/science/article/pii/S014765131100337X
2012 Phenolics and their antifungal role in grapevine wood decay: focus on the Botryosphaeriaceae family Lambert C, Bisson J, Waffo-Teguo P, Papastamoulis Y, Richard T, Corio Costet MF, Mérillon JM, Cluzet ... Journal of Agricultural and Food Chemistry BMP 60: 11859-11868 http://www.ncbi.nlm.nih.gov/pubmed/23145924
2012 Early changes in the fatty acid composition of photosynthetic membrane lipids from Populus nigra grown on a metallurgical landfill Le Guédard M, Faure O, Bessoule JJ Chemosphere BMP 88: 693-698 http://www.ncbi.nlm.nih.gov/pubmed/22531865
2012 Soundness of in situ lipid biomarker analysis: Early effect of heavy metals on leaf fatty acid composition of Lactuca serriola Le Guédard M, Faure O, Bessoule JJ Environmental and Experimental Botany BMP 76: 54-59 http://www.sciencedirect.com/science/article/pii/S0098847211002504
2012 Low doses of bisphenol A induce gene expression related to lipid synthesis and trigger triglyceride accumulation in adult mouse liver Marmugi A, Ducheix S, Lasserre F, Polizzi A, Paris A, Priymenko N, Bertrand-Michel J, Pineau T, Guillou ... Hepatology MetaTOUL 55(2):395-407 http://www.ncbi.nlm.nih.gov/pubmed/?term=Low+doses+of+bisphenol+A+induce+gene+expression+related+to+lipid+synthesis+and+trigger+triglyceride+accumulation+in+adult+mouse+liver
2012 Development of a liquid chromatography/atmospheric pressure photo-ionization high-resolution mass spectrometry analytical method for the simultaneous determination of polybrominated diphenyl ethers and their metabolites: application to BDE-47 metabolism i Marteau C, Chevolleau S, Jouanin I, Perdu E, De Sousa G, Rahmani R, Antignac J-P, LeBizec B, Zalko D, ... Rapid Communications in Mass Spectrometry MetaTOUL 26(6): 599-610 http://dx.doi.org/10.1002/rcm.6136
2012 Photobioreactor design for isotopic non-stationary 13C-metabolic flux analysis (INST 13C-MFA) under photoautotrophic conditions. Martzolff A, Cahoreau E, Cogne G, Peyriga L, Portais JC, Dechandol E, Le Grand F, Massou S, Gonçalves ... Biotechnology and Bioengineering MetaTOUL 109(12):3030-40 http://www.ncbi.nlm.nih.gov/pubmed/22688667
2012 IsoCor: correcting MS data in isotope labeling experiments. Millard P, Letisse F, Sokol S, Portais JC. Bioinformatics MetaTOUL 28(9):1294-6 http://www.ncbi.nlm.nih.gov/pubmed/22419781
2012 ATP synthesis-coupled and -uncoupled acetate production from acetyl-CoA by mitochondrial acetate:succinate CoA-transferase and acetyl-CoA thioesterase in Trypanosoma. Millerioux Y, Morand P, Biran M, Mazet M, Moreau P, Wargnies M, Ebikeme C, Deramchia K, Gales L, Portais ... The Journal of Biological Chemistry MetaTOUL 287(21):17186-97 http://www.ncbi.nlm.nih.gov/pubmed/22474284
2012 Down-regulation of a single auxin efflux transport protein in tomato induces precocious fruit development Mounet F, Moing A, Kowalczyk M, Rohrmann J, Petit J, Garcia V, Maucourt M, Yano K, Deborde C, Aoki K, ... Journal of Experimental Botany BMP 63: 4901-4917 http://jxb.oxfordjournals.org/content/early/2012/07/25/jxb.ers167.full
2012 Link between intestinal CD36 ligand binding and satiety induced by a high protein diet in mice Naville D, Duchampt A, Vigier M, Oursel D, Lessire R, Poirier H, Niot I, Bégeot M, Besnard P, Mithieux ... PLoS ONE BMP 7: e30686 http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0030686
2012 Differential Effects of Bisphenol A and Diethylstilbestrol on Human, Rat and Mouse Fetal Leydig Cell Function N'Tumba-Byn T, Moison D, Lacroix M, Lecureuil C, Lesage L, Prud'homme S M, Pozzi-Gaudin S, Frydman R, ... PLoS ONE MetaTOUL 7(12): e51579 http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0051579
2012 Metabolic Fate of 2,4-Dichlorophenol and Related Plant Residues in Rats Pascal-Lorber S, Despoux S, Jamin E L, Canlet C, Cravedi J-P, Laurent F Journal of Agricultural and Food Chemistry MetaTOUL 60(7): p. 1728-1736 http://dx.doi.org/10.1021/jf203666k
2012 Plasma membrane localization of Solanum tuberosum remorin from Group 1, Homolog 3 is mediated by conformational changes in a novel C-terminal anchor and required for the restriction of Potato Virus X movement Perraki A, Cacas J-L, Crowet J-M, Lins L, Castroviejo M, German-Retana S, Mongrand S, Raffaele S Plant Physiology BMP 160: 624-637 http://www.ncbi.nlm.nih.gov/pubmed/22855937
2012 Co-consumption of methanol and succinate by Methylobacterium extorquens AM1. Peyraud R, Kiefer P, Christen P, Portais JC, Vorholt JA. PLoS One MetaTOUL 7(11):e48271 http://www.ncbi.nlm.nih.gov/pubmed/23133625
2012 Integration of pharmacokinetic and pharmacodynamic data for tulathromycin in healthy and pneumonic calves Potter TJ, Illambas J, Rycroft A, Toutain PL, Lacroix MZ, Lees P Journal of Veterinary Pharmacology and Therapeutics MetaTOUL 35:76 http://WOS:000310251900098
2012 Integration of pharmacokinetic and pharmacodynamic data for amoxicillin in healthy and pneumonic calves Potter TJ, Illambas J, Rycroft A, Toutain PL, Lacroix MZ, Lees P Journal of Veterinary Pharmacology and Therapeutics MetaTOUL 35:76 http://WOS:000310251900098
2012 Novel fragmentation pathways of anionic adducts of steroids formed by electrospray anion attachment involving regioselective attachment, regiospecific decompositions, charge-induced pathways, and ion-dipole complex intermediates. Rannulu NS, Cole RB J Am Soc Mass Spectrom MetabolomeIDF 23(9):1558-68 http://link.springer.com/article/10.1007%2Fs13361-012-0422-y
2012 Phenotypic prediction based on metabolomic data for growing pigs from three main European breeds Rohart F, Paris A, Laurent B, Canlet C, Molina J, Mercat M J, Tribout T, Muller N, Iannuccelli N, Villa-Vialaneix ... Journal of Animal Science MetaTOUL 90(13): p. 4729-4740 http://journalofanimalscience.org/content/90/13/4729.abstract?sid=764a816d-db9c-4bb5-a62d-7738a9678fa0
2012 Contribution of the nuclear receptors PXR and CAR to gene expression modulations induced by fipronil in rodent liver Roques B, Lacroix MZ, Moussaoui N, Leghait J, Puel S, Lasserre F, Guillou H, Viguié C, Martin P Journal of Veterinary Pharmacology and Therapeutics MetaTOUL 35:43-44 http://WOS:000310251900098
2012 CYP450-dependent biotransformation of the insecticide fipronil into fipronil sulfone can mediate fipronil-induced thyroid disruption in rats Roques B B, Lacroix M Z, Puel S, Gayrard V, Picard-Hagen N, Jouanin I, Perdu E, Martin P G, Viguié C Toxicological Science MetaTOUL 127(1): p. 29-41 http://toxsci.oxfordjournals.org/content/127/1/29
2012 Annotation of the human adult urinary metabolome and metabolite identification using ultra high performance liquid chromatography coupled to a linear quadrupole ion trap-orbitrap mass spectrometer Roux A, Xu Y, Heilier JF, Olivier MF, Ezan E, Tabet JC, Junot C. Analytical Chemistry MetabolomeIDF 84(15):6429-37 http://pubs.acs.org/doi/abs/10.1021/ac300829f
2012 TNF? gene knockout differentially affects lipid deposition in liver and skeletal muscle of high-fat-diet mice Salles J, Tardif N, Landrier JF, Mothe-Satney I, Guillet C, Boue-Vaysse C, Combaret L, Giraudet C, Patrac ... Journal of Nutritional Biochemistry MetaTOUL 23(12):1685-93 http://www.ncbi.nlm.nih.gov/pubmed/?term=TNF%CE%B1+gene+knockout+differentially+affects+lipid+deposition+in+liver+and+skeletal+muscle+of+high-fat-diet+mice
2012 Towards interoperable bioscience data Sansone S-A, Rocca-Serra P, Field D, E. Maguire CT, W. Hide,, O. Hofmann HF, S. Neumann, W. Tong, L. ... Nature Genetics BMP 44: 121-126 http://www.ncbi.nlm.nih.gov/pubmed/22281772
2012 The ethylmalonyl-CoA pathway is used in place of the glyoxylate cycle by Methylobacterium extorquens AM1 during growth on acetate Schneider K, Peyraud R, Kiefer P, Christen P, Delmotte N, Massou S, Portais JC, Vorholt JA The Journal of Biological Chemistry MetaTOUL 287(1):757-66 http://www.ncbi.nlm.nih.gov/pubmed/22105076
2012 influx_s: increasing numerical stability and precision for metabolic flux analysis in isotope labelling experiments. Sokol S, Millard P, Portais JC. Bioinformatics MetaTOUL 28(5):687-93 http://www.ncbi.nlm.nih.gov/pubmed/22210866
2012 Distinctive gas-phase fragmentation pathway of the mitorubramines, novel secondary metabolites from Hypoxylon fragiforme. Svilar L, Stankov-Jovanovic V, Stadler M, Nedev H, Tabet JC Rapid Commun Mass Spectrom MetabolomeIDF 26(22):2612-8 http://onlinelibrary.wiley.com/doi/10.1002/rcm.6382/abstract,jsessionid=6F96EFCEDF61D7D6AC661E7E51993AA2.f04t02
2012 High-resolution mass spectrometry and hydrogen/deuterium exchange study of mitorubrin azaphilones and nitrogenized analogues. Svilar L, Stankov-Jovanovic V, Lesage D, Dossmann H, Tabet JC. J Mass Spectrom MetabolomeIDF 47(8):969-77 http://onlinelibrary.wiley.com/doi/10.1002/jms.3044/abstract
2012 Evaluation of three simple direct or indirect carbonyl detection methods for characterization of oxidative modifications of proteins Vasquez-Garzon V R, Rouimi P, Jouanin I, Waeg G, Zarkovic N, Villa-Trevino S, Guéraud F Toxicology Mechanisms and Methods MetaTOUL 22(4): 296-304 http://informahealthcare.com/doi/abs/10.3109/15376516.2012.657258