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Année Titre de la publication Auteurs Nom de la publication Site Référence Lien vers résumé
2013 14C pulse labeling to estimate external fluxes and turnovers in primary metabolism Pianelli K, Monier A, Andrieu M-H, Beauvoit B, Dieuaide-Noubhani M In Dieuaide-Noubhani M & Alonso P (ed) Plant Metabolic Flux Analysis. Methods in Molecular Biology
2013 Modelling metabolic networks - the theories of metabolism. In Metabolomics coming of age with its technological technology Mazat J-P & Beauvoit B In D Rolin, ed, Metabolomics coming of age with its technological diversity. Advances in Botanical Research, P Gadal, JP Jacquot, eds, Elsevier
2013 Metabolomic and elemental profiling of melon fruit quality as affected by genotype and environment Bernillon S, Biais B, Deborde C, Maucourt M, Cabasson C, Gibon Y, Hansen TH, Husted S, De Vos CH, Mumm ... Metabolomics BMP 9: 57-77 http://link.springer.com/article/10.1007/s11306-012-0429-1
2013 Cytosolic NADPH homeostasis in glucose-starved procyclic Trypanosoma brucei relies on malic enzyme and the pentose phosphate pathway fed by gluconeogenic flux. Allmann S, Morand P, Ebikeme C, Gales L, Biran M, Hubert J, Brennand A, Mazet M, Franconi JM, Michels ... The Journal of Biological Chemistry MetaTOUL 288(25):18494-505 http://www.ncbi.nlm.nih.gov/pubmed/23665470
2013 Fast Spatially Encoded 3D NMR Strategies for (13)C-Based Metabolic Flux Analysis. Boisseau R, Charrier B, Massou S, Portais JC, Akoka S, Giraudeau P. Analytical chemistry MetaTOUL 85(20):9751-7 http://www.ncbi.nlm.nih.gov/pubmed/24006900
2013 Metabolomics Tools for Describing Complex Pesticide Exposure in Pregnant Women in Brittany (France) Bonvallot N, Tremblay-Franco M, Chevrier C, Canlet C, Warembourg C, Cravedi J-P, Cordier S PLoS ONE MetaTOUL 8(5): e64433 http://dx.doi.org/10.1371%2Fjournal.pone.0064433
2013 Potential input from metabolomics for exploring and understanding the links between environment and health Bonvallot N, Tremblay-Franco M, Chevrier C, Canlet C, Debrauwer L, Cravedi JP, Cordier S Journal of toxicology and Environmental Health, Part B : Critical Reviews MetaTOUL in press
2013 Kinetic aspects and identification of by-products during the ozonation of bitertanol in agricultural wastewaters Bourgin M, Violleau F, Debrauwer L, Albet J Chemosphere MetaTOUL 90(4): 1387-1395 http://dx.doi.org/10.1016/j.chemosphere.2012.08.014
2013 A vasculo-protective circuit centered on lipoxin A4 and aspirin-triggered 15-epi-lipoxin A4 operative in murine microcirculation Brancaleone V, Gobbetti T, Cenac N, le Faouder P, Colom B, Flower RJ, Vergnolle N, Nourshargh S, Perretti ... Blood MetaTOUL 122(4):608-17 http://www.ncbi.nlm.nih.gov/pubmed/?term=A+vasculo-protective+circuit+centered+on+lipoxin+A4+and+aspirin-triggered+15-epi-lipoxin+A4+operative+in+murine+microcirculation
2013 Effects of low doses of bisphenol A on the metabolome of perinatally exposed CD-1 mice Cabaton N J, Canlet C, Wadia P R, Tremblay-Franco M, Gautier R, Molina J, Sonnenschein C, Cravedi J-P, ... Environmental Health and Perspectives MetaTOUL 121(5): 586-593 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3673190/
2013 Biochemical survey of the polar head of plant glycosylinositolphosphoceramides (GIPC) unravels broad diversity Cacas J, Buré C, Furt F, Maalouf J, Badoc A, Cluzet S, Schmitter J, Antajan E, Mongrand S Phytochemistry BMP in press
2013 Specific metabolic fingerprint of a dietary exposure to a very low dose of endosulfan Canlet C, Tremblay-Franco M, Gautier R, Molina J, Métais J, Blas-Y-Estrada F, Gamet-Payrastre L Journal of Toxicology MetaTOUL ID545802, 11 pages http://www.hindawi.com/journals/jt/2013/545802/
2013 New untargeted metabolic profiling combining mass spectrometry and isotopic labeling: application on A. fumigatus grown on wheat Cano P M, Jamin E L, Tadrist S, Bourdaud'hui P, Péan M, Debrauwer L, Oswald I P, Delaforge M, Puel O Analytical Chemistry MetaTOUL 85(17): 8412-8420 http://dx.doi.org/10.1021/ac401872f
2013 Retropath: Automated Pipeline for Embedded Metabolic Circuits Carbonell P, Parutto P, Baudier C, Junot C, Faulon JL ACS Synth Biol MetabolomeIDF in press
2013 Bioactive stilbenes from Vitis vinifera grapevine shoots extracts Chaher N, Arraki K, Dillinseger E, Temsamani H, Bernillon S, Pedrot E, Delaunay J-C, Merillon J-M, Monti ... Journal of the Science of Food Agriculture BMP in press
2013 Oil composition and characterisation of phenolic compounds of Opuntia ficus-indica seeds Chougui N, Tamendjari A, Hamidj W, Hallal S, Barras A, Richard T, Larbat R Food Chemistry BMP 139: 796-803 http://www.ncbi.nlm.nih.gov/pubmed/23561175
2013 Bisphenol A Disposition in the Sheep Maternal-Placental-Fetal Unit: Mechanisms Determining Fetal Internal Exposure Corbel T, Gayrard V, Viguié C, Puel S, Lacroix M Z, Toutain P-L, Picard-Hagen N Biology of Reproduction MetaTOUL 89(1): 1-9 http://www.biolreprod.org/content/89/1/11.abstract
2013 Disposition of fipronil in rats Cravedi J P, Delous G, Zalko D, Viguié C, Debrauwer L Chemosphere MetaTOUL 93: 2276-2283 http://dx.doi.org/10.1016/j.chemosphere.2013.07.083
2013 Intermolecular interactions between neurotensin and the third extracellular loop of human neurotensin 1 receptor Da Costa G, Bondon A, Coutant J, Curmi P, Monti JP Journal of Biomolecular Structure and Dynamics BMP in press
2013 Dietary exposure to a low dose of pesticides alone or as a mixture: The biological metabolic fingerprint and impact on hematopoiesis Demur C, Métais B, Canlet C, Tremblay-Franco M, Gautier R, Blas-Y-Estrada F, Sommer C, Gamet-Payrastre ... Toxicology MetaTOUL 308: 74-87 http://dx.doi.org/10.1016/j.tox.2013.03.004
2013 Mining the brain metabolome to understand behavioural disruptions induced in mouse fed Hypochoeris radicata (L.), a neurotoxic plant for horse Domange C, Schroeder H, Violle N, Peiffer J, Canlet C, Paris A, Priymenko N Neurotoxicology MetaTOUL Vol 38, pp.74-83 http://dx.doi.org/10.1016/j.neuro.2013.06.005
2013 Essential fatty acids deficiency promotes lipogenic gene expression and hepatic steatosis through the liver X receptor Ducheix S, Montagner A, Polizzi A, Lasserre F, Marmugi A, Bertrand-Michel J, Podechard N, Al Saati T, ... Journal of Hepatology MetaTOUL 58(5):984-92 http://www.ncbi.nlm.nih.gov/pubmed?term=essential%20fatty%20acid%20deficiency%20promotes%20lipogenic%20gene%20expression%20and%20hepatic%20steatosis%20through%20the%20liver%20x%20receptor&cmd=correctspelling
2013 The lipid world concept of plant lipidomic Fouillen L, Colsch B, Lessire R (2013) The lipid world concept of plant lipidomic. In D Rolin, ed, Metabolomics ... In D Rolin, ed, Metabolomics coming of age with its technological diversity, Advances in Botanical Research. Academic Press BMP 67 http://store.elsevier.com/Metabolomics-Coming-of-Age-with-its-Technological-Diversity/isbn-9780123979223/
2013 21-Methylpyrenyl-cholesterol stably and specifically associates with lipoprotein peripheral hemi-membrane: A new labelling tool Gaibelet G, Tercé F, Bertrand-Michel J, Allart S, Azalbert V, Lecompte MF, Collet X, Orlowski S Biocgemical and Biophysical Research Communications MetaTOUL 440(4):533-8 http://www.ncbi.nlm.nih.gov/pubmed/?term=21-Methylpyrenyl-cholesterol+stably+and+specifically+associates+with+lipoprotein+peripheral+hemi-membrane%3A+A+new+labelling+tool
2013 Enhanced skeletal muscle lipid oxidative efficiency in insulin-resistant vs insulin-sensitive nondiabetic, nonobese humans Galgani JE, Vasquez K, Watkins G, Dupuy A, Bertrand-Michel J, Levade T, Moro C Journal of Clinical Endocrinology and Metabolism MetaTOUL 98(4):E646-53 http://www.ncbi.nlm.nih.gov/pubmed/?term=Enhanced+skeletal+muscle+lipid+oxidative+efficiency+in+insulin-resistant+vs+insulin-sensitive+nondiabetic%2C+nonobese+humans
2013 A diminution in ascorbate oxidase activity affects carbon allocation and improves yield in tomato under water-deficit Garchery C, Gest N, Do PT, Alhagdow M, Baldet P, Ménard G, Rothan C, Massot C, Gautier H, Aarrouf J, ... Plant Cell & Environment BMP 36: 159-175 http://www.ncbi.nlm.nih.gov/pubmed/22725103
2013 High Bioavailability of Bisphenol A from Sublingual Exposure Gayrard V, Lacroix M Z, Collet S H, Viguié C, Bousquet-Melou A, Toutain P L, Picard-Hagen N Environmental Health Perspectives MetaTOUL 121(8): 951-956 http://ehp.niehs.nih.gov/wp
2013 Polyunsaturated fatty acid metabolism signature in ischemia differs from reperfusion in mouse intestine Gobbetti T, Le Faouder P, Bertrand J, Dubourdeau M, Barocelli E, Cenac N, Vergnolle N Plos One MetaTOUL 20,8(9):e75581 http://www.ncbi.nlm.nih.gov/pubmed/?term=Polyunsaturated+fatty+acid+metabolism+signature+in+ischemia+differs+from+reperfusion+in+mouse+intestine
2013 Phosphoinositide substrates of myotubularin affect voltage-activated Ca2+ release in skeletal muscle González Rodríguez E, Lefebvre R, Bodnár D, Legrand C, Szentesi P, Vincze J, Poulard K, Bertrand-Michel ... Pflügers Archiv-European Journal of Physiology MetaTOUL http://www.ncbi.nlm.nih.gov/pubmed/?term=Phosphoinositide+substrates+of+myotubularin+affect+voltage-activated+Ca2%2B+release+in+skeletal+muscle
2013 New insights into sulfur metabolism in yeasts as revealed by studies of Yarrowia lipolytica Hébert A, Forquin-Gomez MP, Roux A, Aubert J, Junot C, Heilier JF, Landaud S, Bonnarme P, Beckerich ... Appl Environ Microbiol MetabolomeIDF 79(4):1200-11 http://aem.asm.org/content/79/4/1200.full.pdf+html
2013 Collision cell pressure effect on CID spectra pattern using triple quadrupole instruments: a RRKM modeling. Ichou F, Lesage D, Machuron-Mandard X, Junot C, Cole RB, Tabet JC J Mass Spectrom MetabolomeIDF 48(2):179-86 http://onlinelibrary.wiley.com/doi/10.1002/jms.3143/abstract
2013 An efficient spectra processing method for metabolite identification from 1H-NMR metabolomics data Jacob D, Deborde C, Moing A Analytical and Bioanalytical Chemistry BMP 405: 5049-5061 http://www.ncbi.nlm.nih.gov/pubmed/23525538
2013 Influence of skin metabolism on qualitative dermal delivery of testosterone: assessment using a new long-term skin model Jacques C, Perdu E, Jamin E L, Cravedi J-P, Mavon A, Duplan H, Zalko D Skin Pharmacology and Physiology MetaTOUL in presss
2013 Untargeted metabolite profiling of pesticides by LC-HRMS: an exposomics tool for human exposure evaluation Jamin E, Bonvallot N, Tremblay-Franco M, Cravedi J-P, Chevrier C, Cordier S, Debrauwer L Analytical and Bioanalytical Chemistry MetaTOUL in press http://link.springer.com/article/10.1007/s00216-013-7136-2
2013 Combined Genotoxic Effects of a Polycyclic Aromatic Hydrocarbon (B(a)P) and an Heterocyclic Amine (PhIP) in Relation to Colorectal Carcinogenesis Jamin E L, Riu A, Douki T, Debrauwer L, Cravedi J-P, Zalko D, Audebert M PLoS ONE MetaTOUL 8(3): p. e58591 http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0058591
2013 Characterization of endocrine disruptors from a complex matrix using estrogen receptor affinity columns and high performance liquid chromatography-high resolution mass spectrometry Jondeau-Cabaton A, Soucasse A, Jamin E L, Creusot N, Grimaldi M, Jouanin I, Ait-Aissa S, Balaguer P, ... Environmental Science and Pollution Research MetaTOUL 20(5): 2705-20 http://link.springer.com/article/10.1007/s11356-012-1458-z
2013 Modelling metabolic networks using graphs: reconstruction, storage and visualization Jourdan F Advances in Botanichal Research MetaTOUL Vol 67, pp. 557-592. http://www.elsevier.com/books/metabolomics-coming-of-age-with-its-technological-diversity/unknown/978-0-12-397922-3
2013 High resolution mass spectrometry based techniques at the crossroads of metabolic pathways. Junot C, Fenaille F, Colsch B, Bécher F. Mass Spectrom Rev. MetabolomeIDF in press http://onlinelibrary.wiley.com/doi/10.1002/mas.21401/abstract,jsessionid=767E7D7BB155EF220C81636AA4079871.f01t04?systemMessage=Wiley+Online+Library+will+be+disrupted+on+7+December+from+10%3A00-15%3A00+BST+%2805%3A00-10%3A00+EDT%29+for+essential+maintenance
2013 Towards models for the prediction of beef meat quality during cooking Kondjoyan A, Kohler A, Realini C E, Portanguen S, Kowalski R, Clerjon S, Gatellier P, Chevolleau S, ... Meat Science MetaTOUL in press http://www.sciencedirect.com/science/article/pii/S0309174013003598
2013 Combining metabolomics and gene expression analysis reveals that propionyl- and butyryl-carnitines are involved in late stages of arbuscular mycorrhizal symbiosis. Laparre J*, Malbreil M*, Letisse F, Portais JC, Roux C, Bécard G, Puech-Pagès V Molecular Plant MetaTOUL doi: 10.1093/mp/sst136 http://mplant.oxfordjournals.org/cgi/pmidlookup?view=long&pmid=24121293
2013 LC-MS/MS method for rapid and concomitant quantification of pro-inflammatory and pro-resolving polyunsaturated fatty acid metabolites Le Faouder P, Baillif V, Spreadbury I, Motta JP, Rousset P, Chêne G, Guigné C, Tercé F, Vanner S, Vergnolle ... Journal of Chromatography B Analytical Technologies in the Biomedical Sciences MetaTOUL 932:123-3 http://www.ncbi.nlm.nih.gov/pubmed/?term=LC-MS%2FMS+method+for+rapid+and+concomitant+quantification+of+pro-inflammatory+and+pro-resolving+polyunsaturated+fatty+acid+metabolites
2013 Soil water stress affects both cuticular wax content and cuticle-related gene expression in young saplings of maritime pine (Pinus pinaster Ait) Le Provost G, Domergue F, Lalanne C, Ramos Campos P, Grosbois A, Bert D, Meredieu C, Danjon F, Plomion ... BMC Plant Biology BMP 0.607638889 http://link.springer.com/article/10.1186%2F1471-2229-13-95#page-1
2013 Combination of lipid metabolism alterations and their sensitivity to inflammatory cytokines in human lipin-1-deficient myoblasts Michot C, Mamoune A, Vamecq J, Viou MT, Hsieh L-S, Testet E, Lainé J, Hubert L, Dessein AF, Fontaine ... Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease BMP 1832: 2103-2114 http://www.ncbi.nlm.nih.gov/pubmed/23928362
2013 IsoDesign: A software for optimizing the design of 13 C-metabolic flux analysis experiments. Millard P, Sokol S, Letisse F, Portais JC. Biotechnology and Bioengineering MetaTOUL Epub ahead of print http://www.ncbi.nlm.nih.gov/pubmed/23893473
2013 Telling metabolic stories to explore metabolomics data: A case study on the Yeast response to cadmium exposure Milreu PV, Klein CC, Cottret L, Acuña V, Birmelé E, Borassi M, Junot C, Marchetti-Spaccamela A, Marino ... Bioinformatics MetabolomeIDF in press http://bioinformatics.oxfordjournals.org/content/early/2013/11/19/bioinformatics.btt597.full.pdf+html
2013 Improving palm oil quality through identification and mapping of the lipase gene causing oil deterioration Morcillo F, Cros D, Billotte N, Ngando-Ebongue G, Domonhédo H, Pizot M, Cuéllar T, Espéout S, Dhouib ... Nature Communications BMP 1.666666667 http://www.ncbi.nlm.nih.gov/pubmed/23857501
2013 Salivary markers of taste sensitivity to oleic acid: a combined proteomics and metabolomics approach Mounayar R, Morzel M, Brignot H, Tremblay-Franco M, Canlet C, Lucchi G, Ducoroy P, Feron G, Neyraud ... Metabolomics MetaTOUL in press http://dx.doi.org/10.1007/s11306-013-0602-1
2013 Aphanomyces euteiches cell wall fractions containing novel glucan-chitosaccharides induce defense genes and nuclear calcium oscillations in the plant host Medicago truncatula. Nars A, Lafitte C, Chabaud M, Drouillard S, Mélida H, Danoun S, Le Costaouëc T, Rey T, Benedetti J, ... PlosOne MetaTOUL 23,8(9):e75039 http://dx.plos.org/10.1371/journal.pone.0075039
2013 Relationships between the metabolome and the fatty acid composition of human saliva, effects of stimulation Neyraud E, Tremblay-Franco M, Gregoire S, Berdeaux O, Canlet C Metabolomics MetaTOUL 9(1): 213-222 http://dx.doi.org/10.1007/s11306-012-0440-6
2013 Lipid composition of multilamellar bodies secreted by Dictyostelium discoideum reveals their amoebal origin Paquet VE, Lessire R, Domergue F, Fouillen L, Filion G, Sedighi A, Charette SJ Eukaryotic Cell BMP 10:1326-1334 http://www.ncbi.nlm.nih.gov/pubmed/23748431
2013 Deciphering genetic diversity and inheritance of tomato fruit weight and composition through a systems biology approach Pascual L, Xu J, Biais B, Maucourt M, Ballias P, Bernillon S, Deborde C, Jacob D, Desgroux A, Faurobert ... Journal of Experimental Botany BMP in press
2013 Chemical dereplication of wine stilbenoids using high performance liquid chromatography-nuclear magnetic resonance spectroscopy Pawlus AD, Cantos-Villar E, Richard T, Bisson J, Poupard P, Papastamoulis Y, Monti J-P, Teissedre P-L, ... Journal of Chromatography A BMP 1289: 19-26 http://www.ncbi.nlm.nih.gov/pubmed/23566915
2013 Stilbenoid profiles of canes from Vitis and Muscadinia species Pawlus AD, Sahli R, Bisson J, Rivière C, Delaunay J-C, Richard T, Gomès E, Bordenave L, Waffo-Téguo ... Journal of Agricultural and Food Chemistry BMP 61: 501-511 http://www.ncbi.nlm.nih.gov/pubmed/23270496
2013 Screening and identification of glyceollins and their metabolites by electrospray ionization tandem mass spectrometry with precursor ion scanning. Quadri SS, Stratford RE, Boué SM, Cole RB. Anal. Chem. MetabolomeIDF 85(3):1727-33 http://pubs.acs.org/doi/abs/10.1021/ac3030398
2013 The carbon storage regulator (Csr) system exerts a nutrient-specific control over central metabolism in Escherichia coli strain Nissle 1917. Revelles O, Millard P, Nougayrède JP, Dobrindt U, Oswald E, Létisse F, Portais JC. PLoS One MetaTOUL 8(6):e66386 http://www.ncbi.nlm.nih.gov/pubmed/23840455
2013 Application of LC-MS and LC-NMR techniques for secondary metabolite identification Richard T, Temsamani H, Cantos-Villar E, Monti JP In D Rolin, ed, Metabolomics coming of age with its technological diversity, Advances in Botanical Research. Academic Press BMP 67 http://store.elsevier.com/Metabolomics-Coming-of-Age-with-its-Technological-Diversity/isbn-9780123979223/
2013 High-resolution 1H-NMR spectroscopy and beyond to explore plant metabolome Rolin D, Deborde C, Maucourt M, Cabasson C, Fauvelle F, Jacob D, Canlet C, Moing A In D Rolin, ed, Metabolomics coming of age with its technological diversity, Advances in Botanical Research. Academic Press BMP 67 http://store.elsevier.com/Metabolomics-Coming-of-Age-with-its-Technological-Diversity/isbn-9780123979223/
2013 The nuclear receptors Pregnane X Receptor and Constitutive Androstane Receptor contribute to the impact of fipronil on hepatic gene expression linked to thyroid hormone metabolism Roques B, Leghait J, Lacroix M, Lasserre F, Pineau T, Viguié C, Martin P Biochemical Pharmacology MetaTOUL 86(7): 997-1039 http://www.sciencedirect.com/science/article/pii/S000629521300498X
2013 SlARF4, an Auxin Response Factor involved in the control of sugar metabolism during tomato fruit development Sagar M, Chervin C, Mila I, Hao YW, Roustan JP, Benichou M, Gibon Y, Biais B, Maury P, Latche A, Pech ... Plant Physiology BMP 161: 1362-1374 http://www.ncbi.nlm.nih.gov/pubmed/23341361
2013 Influence of fine process particles enriched with metals and metalloids on Lactuca sativa L. leaf fatty acid composition following air and/or soil-plant field exposure Schreck E, Laplanche C, Le Guédard M, Bessoule JJ, Austruy A, Xiong T, Foucault Y, Dumat C Environmental Pollution BMP 179: 242-249 http://www.ncbi.nlm.nih.gov/pubmed/23694728
2013 Identification tree based on fragmentation rules for structure elucidation of organophosphorus esters by electrospray mass spectrometry. Schwarzenberg A, Ichou F, Cole RB, Machuron-Mandard X, Junot C, Lesage D, Tabet JC J Mass Spectrom MetabolomeIDF 48(5):576-86 http://onlinelibrary.wiley.com/doi/10.1002/jms.3180/abstract,jsessionid=F1D7A89F2B50529A4E76706D26320BC2.f03t01
2013 Mitochondrial energetic and AKT status mediate metabolic effects and apoptosis of metformin in human leukemic cells. Scotland S, Saland E, Skuli N, de Toni F, Boutzen H, Micklow E, Sénégas I, Peyraud R, Peyriga L, Théodoro ... Leukemia MetabolomeIDF/MetaTOUL 27(11):2129-38 http://www.nature.com/leu/journal/v27/n11/full/leu2013107a.html
2013 Lipidomic and spatio-temporal imaging of fat by mass spectrometry in mice duodenum during lipid digestion Seyer A, Cantiello M, Bertrand-Michel J, Roques V, Nauze M, Bézirard V, Collet X, Touboul D, Brunelle ... Plos One MetaTOUL 8(4):e58224 http://www.ncbi.nlm.nih.gov/pubmed/?term=Lipidomic+and+spatio-temporal+imaging+of+fat+by+mass+spectrometry+in+mice+duodenum+during+lipid+digestion
2013 The gene PatG involved in the biosynthesis pathway of patulin, a food-borne mycotoxin, encodes a 6-methylsalicylic acid decarboxylase Snini S, Tadrist S, Laffitte J, Jamin E, Oswald I, Puel O International Journal of Food Microbiology MetaTOUL In press.
2013 Isolation of powerful antioxidants from the medicinal halophyte Limoniastrum guyonianum Trabelsi N, Oueslati S, Falleh H, Waffo-Téguo P, Papastamoulis Y, Mérillon J-M, Abdelly C, Ksouri R Food Chemistry BMP 135: 1419-1424 http://www.ncbi.nlm.nih.gov/pubmed/22953875
2013 Telling metabolic stories to explore metabolomics data: A case study on the Yeast response to cadmium exposure. Vieira Milreu P, Coimbra Klein C, Cottret L, Acuna V, Birmelé E, Borassi M, Junot C, Marchetti-Spaccamela ... Bioinformatics MetaTOUL In press. http://bioinformatics.oxfordjournals.org/content/early/2013/10/27/bioinformatics.btt597.abstract
2013 Maternal and Fetal Exposure to Bisphenol A Is Associated with Alterations of Thyroid Function in Pregnant Ewes and Their Newborn Lambs Viguié C, Collet S H, Gayrard V, Picard-Hagen N, Puel S, Roques B B, Toutain P-L, Lacroix M Z Endocrinology MetaTOUL 154(1): 521-528 http://endo.endojournals.org/content/154/1/521.abstract
2013 Metabolic Flux Analysis. In : Metabolomics in practice : successful strategies to generate and analyze metabolic data Wittmann C. and Portais JC Lämmerhofer & Werckwerth Eds., WILEY, Weinheim, Germany MetaTOUL ISBN: 978-3-527-33089-8 http://eu.wiley.com/WileyCDA/WileyTitle/productCd-3527330895.html
2012 Anthocyanin identification and composition of wild Vitis spp. accessions by using LC-MS and LC-NMR Acevedo de la Cruz A, Hilbert G, Rivière C, Mengin V, Ollat N, Bordenave L, Decrocq S, Delaunay JC, ... Analytica Chimica Acta BMP 732: 145-152 http://www.sciencedirect.com/science/article/pii/S000326701101628X
2012 Telling Stories: Enumerating maximal directed acyclic graphs with a constrained set of sources and targets Acuña V, Etienne Birmelé E, Cottret L, Crescenzi P, Jourdan F, Lacroix V, Marchetti-Spaccamela A, Marino ... Theoretical Computer Science MetaTOUL 457: 1-9 http://www.sciencedirect.com/science/article/pii/S0304397512007207
2012 Role of low-density lipoprotein receptor in the hepatitis C virus life cycle Albecka A, Belouzard S, Op de Beeck A, Descamps V, Goueslain L, Bertrand-Michel J, Tercé F, Duverlie ... Hepatology MetaTOUL 55(4):998-1007 http://www.ncbi.nlm.nih.gov/pubmed/22121002
2012 YPR139c/LOA1 encodes a novel lysophosphatidic acid acyltransferase associated with lipid droplets and involved in TAG homeostasis Ayciriex S, Le Guédard M, Camougrand N, Velours G, Schoene M, Wattelet-Boyer V, Dupuy J-W, Shevchenko ... Molecular Biology of the Cell BMP 23: 233-246 http://www.ncbi.nlm.nih.gov/pubmed/22090344
2012 (homo)glutathione deficiency impairs Meloidogine incognita development in Medicago truncatula Baldacci F, Chang C, Maucourt M, Deborde C, Hopkins J, Lecomte P, Bernillon S, Brouquisse R, Moing A, ... PLoS Pathogens BMP 8: e1002471 http://www.plospathogens.org/article/info%3Adoi%2F10.1371%2Fjournal.ppat.1002471
2012 Exosomal lipids impact notch signaling and induce death of human pancreatic tumoral SOJ-6 cells Beloribi S, Ristorcelli E, Breuzard G, Silvy F, Bertrand-Michel J, Beraud E, Verine A, Lombardo D Plos One MetaTOUL 7(10):e47480 http://www.ncbi.nlm.nih.gov/pubmed/?term=Exosomal+lipids+impact+notch+signaling+and+induce+death+of+human+pancreatic+tumoral+SOJ-6+cells
2012 The lipogenic transcription factor ChREBP dissociates hepatic steatosis from insulin resistance in mice and humans Benhamed F, Denechaud PD, Lemoine M, Robichon C, Moldes M, Bertrand-Michel J, Ratziu V, Serfaty L, Housset ... Journal of Clinical Investigation MetaTOUL 22(6):2176-94 http://www.ncbi.nlm.nih.gov/pubmed/?term=The+lipogenic+transcription+factor+ChREBP+dissociates+hepatic+steatosis+from+insulin+resistance+in+mice+and+humans
2012 Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis CER1 and CER3 are core components of a VLC-alkane synthesis complex Bernard A, Domergue F, Pascal S, Jetter R, Renne C, Faure JD, Haslam RP, Napier JA, Lessire R, Joubès ... The Plant Cell BMP 24: 1-13 http://www.plantcell.org/content/24/7/3106.full
2012 Precautions for harvest, sampling, storage and transport of crop plant metabolomics samples Biais B, Bernillon S, Deborde C, Cabasson C, Rolin D, Tadmor Y, Burger J, Schaffer AA, Moing A (2012) ... In N Hardy, R Hall, eds, Plant Metabolomics. Humana Press, Totowa, U.S.A. BMP 860: 51-63 http://www.ncbi.nlm.nih.gov/pubmed/22351170
2012 Electronic effects of 11? substituted 17?-estradiol derivatives and instrumental effects on the relative gas phase acidity. Bourgoin-Voillard S, Fournier F, Afonso C, Zins EL, Jacquot Y, Pèpe C, Leclercq G, Tabet JC. J Am Soc Mass Spectrom MetabolomeIDF 23(12):2167-77 http://link.springer.com/article/10.1007%2Fs13361-012-0486-8
2012 Lipids of plant membrane rafts Cacas JL, Furt F, Le Guédard M, Schmitter J, Buré C, Gerbeau-Pissot P, Moreau P, Bessoule J, Simon-Plas ... Progress in Lipid Research BMP 51: 272-299 http://www.ncbi.nlm.nih.gov/pubmed/22554527
2012 Rapid nanoscale quantitative analysis of plant sphingolipid long chain bases by GC-MS Cacas JL, Melser S, Domergue F, Joubès J, Bourdenx B, Schmitter JM, Mongrand S Analytical Bioanalytical Chemistry BMP 403: 2745-2755 http://www.ncbi.nlm.nih.gov/pubmed/22576656
2012 Isotopic profiling of ¹³C-labeled biological samples by two-dimensional heteronuclear J-resolved nuclear magnetic resonance spectroscopy. Cahoreau E, Peyriga L, Hubert J, Bringaud F, Massou S, Portais JC. Analytical Biochemistry MetaTOUL 427(2):158-63 http://www.ncbi.nlm.nih.gov/pubmed/22658961
2012 A genomics and multi-platform metabolomics approach to identify new traits of rice quality in traditional and improved varieties Calingacion MN, Boualaphanh C, Daygon VD, Anacleto R, Sackville Hamilton R, Biais B, Deborde C, Maucourt ... Metabolomics BMP 8: 771-783 http://link.springer.com/article/10.1007/s11306-011-0374-4
2012 NMR metabolomic approaches for plants, toxicology and medicine Canlet C, Shintu L, Elena-Herrmann B Actualité Chimique MetaTOUL 364: 59-68 http://WOS:000307795900014
2012 Characterization of maternal and fetal bisphenol A disposition in a physiologically-based sheep model Corbel T, Gayrard V, Viguie C, Puel S, Lacroix M Z, Toutain P L, Hagen-Picard N Journal of Veterinary Pharmacology and Therapeutics MetaTOUL 35: 64 http://WOS:000310251900098
2012 Occurrence, biosynthesis and functions of N-acylphosphatidylethanolamines (NAPE): Not just precursors of N-acylethanolamines (NAE) Coulon D, Faure L, Salmon M, Wattelet V, Bessoule JJ Biochimie BMP 94: 75-85 http://www.ncbi.nlm.nih.gov/pubmed/21575672
2012 N-Acylethanolamines and related compounds: aspects of metabolism and functions Coulon DF, Salmon M, Wattelet V, Bessoule J Plant Science BMP 184: 129-140 http://www.ncbi.nlm.nih.gov/pubmed/22284717
2012 Elucidation by NMR solution of neurotensin in Small Unilamellar Vesicle environment: molecular surveys for neurotensin receptor recognition Da Costa G, Bondon A, Delalande O, Mouret L, Monti JP Journal of Biomolecular Structure and Dynamics BMP 31: 809-817 http://www.ncbi.nlm.nih.gov/pubmed/22928939
2012 Exploring plant primary metabolism with MeRy-B a metabolomic database and knowledge base dedicated to plant Deborde C, Jacob D (2012) Exploring plant primary metabolism with MeRy-B a metabolomic database and ... In G Sriram, ed, Plant Metabolism: Methods and Protocols. Series: Methods in Molecular Biology, Vol. 1083 Humana Press BMP http://www.springer.com/life+sciences/plant+sciences/book/978-1-62703-660-3
2012 Arabidopsis wat1 (walls are thin1)-mediated resistance to the bacterial vascular pathogen, Ralstonia solanacearum, is accompanied by cross-regulation of salicylic acid and tryptophan metabolism. Denancé N, Ranocha P, Oria N, Barlet X, Rivière MP, Yadeta KA, Hoffmann L, Perreau F, Clément G, Maia-Grondard ... Plant Journal MetaTOUL 15. doi: 10.1111/tpj.12027.  http://dx.doi.org/10.1111/tpj.12027
2012 A systems biology approach to the hepatic role of the oxysterol receptor LXR in the regulation of lipogenesis highlights a cross-talk with PPAR?Biochimie Ducheix S, Podechard N, Lasserre F, Polizzi A, Pommier A, Murzilli S, Di Lisio C, D'Amore S, Bertrand-Michel ... Biochimie MetaTOUL 95(3):556-67 http://www.ncbi.nlm.nih.gov/pubmed/?term=A+systems+biology+approach+to+the+hepatic+role+of+the+oxysterol+receptor+LXR+in+the+regulation+of+lipogenesis+highlights+a+cross-talk+with+PPAR%CE%B1Biochimie
2012 Isorhapontigenin: a novel bioactive stilbene from wine grapes Fernández-Marín MI, Guerrero RF, García-Parrilla MC, Puertas B, Richard T, Rodriguez-Werner MA, Winterhalter ... Food Chemistry BMP 135: 1353-1359 http://www.ncbi.nlm.nih.gov/pubmed/22953865
2012 Parallel Biotransformation of Tetrabromobisphenol A in Xenopus laevis and Mammals: Xenopus as a Model for Endocrine Perturbation Studies Fini J-B, Riu A, Debrauwer L, Hillenweck A, Le Mével S, Chevolleau S, Boulahtouf A, Palmier K, Balaguer ... Toxicological Sciences MetaTOUL 125(2): 359-367 http://toxsci.oxfordjournals.org/content/125/2/359
2012 Trypacidin, a Spore-Borne Toxin from Aspergillus fumigatus, Is Cytotoxic to Lung Cells Gauthier T, Wang X, Sifuentes Dos Santos J, Fysikopoulos A, Tadrist S, Canlet C, Artigot M P, Loiseau ... PLoS ONE MetaTOUL 7(2): e29906 http://dx.doi.org/10.1371%2Fjournal.pone.0029906
2012 Lipid rafts Germain V, Perraki A, Mongrand S (2012) In Enclycopedia of Life Science BMP DOI: 10.1002/9780470015902.a0023727 http://www.els.net/WileyCDA/ElsArticle/refId-a0023727.html
2012 Flux analysis of the Trypanosoma brucei glycolysis based on a multi-objective criteria bioinformatic approach Ghozlane A, Bringaud F, Souedan H, Dutour I, Jourdan F, Thébault P Advances in Bioinformatics MetaTOUL 2012:159423 http://www.hindawi.com/journals/abi/2012/159423/
2012 Aspects of experimental design for plant metabolomics experiments and guidelines for growth of plant material Gibon Y, Rolin D n N Hardy, R Hall, eds, Plant Metabolomics. Humana Press, Totowa, U.S.A. BMP 860: 13-30 http://www.ncbi.nlm.nih.gov/pubmed/22351168
2012 New opportunities in metabolomics and biochemical phenotyping for plant systems biology Gibon Y, Rolin D, Deborde C, Bernillon S, Moing A In U Roessner, ed, Metabolomics. InTech BMP Jan-2029 http://www.intechopen.com/articles/show/title/new-opportunities-in-metabolomics-and-biochemical-phenotyping-for-plant-systems-biology
2012 UFJCOSY: a fast 3D NMR method for measuring isotopic enrichments in complex samples. Giraudeau P, Cahoreau E, Massou S, Pathan M, Portais JC, Akoka S. ChemPhysChem MetaTOUL 13(13):3098-101 http://www.ncbi.nlm.nih.gov/pubmed/22736503
2012 Cytotoxicity and genotoxicity of versicolorins and 5-methoxysterigmatocystin in A549 cells Jaksic D, Puel O, Canlet C, Kopjar N, Kosalec I, Klaric Maja S Archives of Toxicology MetaTOUL 86(10): 1583-1591 http://dx.doi.org/10.1007/s00204-012-0871-x
2012 Assessment of the genotoxicity of quinolone and fluoroquinolones contaminated soil with the Vicia faba micronucleus test Khadra A, Pinelli E, Lacroix M Z, Bousquet-Melou A, Hamdi H, Merlina G, Guiresse M, Hafidi M Ecotoxicology and Environmental Safety MetaTOUL 76: 187-192 http://www.sciencedirect.com/science/article/pii/S014765131100337X
2012 Phenolics and their antifungal role in grapevine wood decay: focus on the Botryosphaeriaceae family Lambert C, Bisson J, Waffo-Teguo P, Papastamoulis Y, Richard T, Corio Costet MF, Mérillon JM, Cluzet ... Journal of Agricultural and Food Chemistry BMP 60: 11859-11868 http://www.ncbi.nlm.nih.gov/pubmed/23145924
2012 Early changes in the fatty acid composition of photosynthetic membrane lipids from Populus nigra grown on a metallurgical landfill Le Guédard M, Faure O, Bessoule JJ Chemosphere BMP 88: 693-698 http://www.ncbi.nlm.nih.gov/pubmed/22531865
2012 Soundness of in situ lipid biomarker analysis: Early effect of heavy metals on leaf fatty acid composition of Lactuca serriola Le Guédard M, Faure O, Bessoule JJ Environmental and Experimental Botany BMP 76: 54-59 http://www.sciencedirect.com/science/article/pii/S0098847211002504
2012 Low doses of bisphenol A induce gene expression related to lipid synthesis and trigger triglyceride accumulation in adult mouse liver Marmugi A, Ducheix S, Lasserre F, Polizzi A, Paris A, Priymenko N, Bertrand-Michel J, Pineau T, Guillou ... Hepatology MetaTOUL 55(2):395-407 http://www.ncbi.nlm.nih.gov/pubmed/?term=Low+doses+of+bisphenol+A+induce+gene+expression+related+to+lipid+synthesis+and+trigger+triglyceride+accumulation+in+adult+mouse+liver
2012 Development of a liquid chromatography/atmospheric pressure photo-ionization high-resolution mass spectrometry analytical method for the simultaneous determination of polybrominated diphenyl ethers and their metabolites: application to BDE-47 metabolism i Marteau C, Chevolleau S, Jouanin I, Perdu E, De Sousa G, Rahmani R, Antignac J-P, LeBizec B, Zalko D, ... Rapid Communications in Mass Spectrometry MetaTOUL 26(6): 599-610 http://dx.doi.org/10.1002/rcm.6136
2012 Photobioreactor design for isotopic non-stationary 13C-metabolic flux analysis (INST 13C-MFA) under photoautotrophic conditions. Martzolff A, Cahoreau E, Cogne G, Peyriga L, Portais JC, Dechandol E, Le Grand F, Massou S, Gonçalves ... Biotechnology and Bioengineering MetaTOUL 109(12):3030-40 http://www.ncbi.nlm.nih.gov/pubmed/22688667
2012 IsoCor: correcting MS data in isotope labeling experiments. Millard P, Letisse F, Sokol S, Portais JC. Bioinformatics MetaTOUL 28(9):1294-6 http://www.ncbi.nlm.nih.gov/pubmed/22419781
2012 ATP synthesis-coupled and -uncoupled acetate production from acetyl-CoA by mitochondrial acetate:succinate CoA-transferase and acetyl-CoA thioesterase in Trypanosoma. Millerioux Y, Morand P, Biran M, Mazet M, Moreau P, Wargnies M, Ebikeme C, Deramchia K, Gales L, Portais ... The Journal of Biological Chemistry MetaTOUL 287(21):17186-97 http://www.ncbi.nlm.nih.gov/pubmed/22474284
2012 Down-regulation of a single auxin efflux transport protein in tomato induces precocious fruit development Mounet F, Moing A, Kowalczyk M, Rohrmann J, Petit J, Garcia V, Maucourt M, Yano K, Deborde C, Aoki K, ... Journal of Experimental Botany BMP 63: 4901-4917 http://jxb.oxfordjournals.org/content/early/2012/07/25/jxb.ers167.full
2012 Link between intestinal CD36 ligand binding and satiety induced by a high protein diet in mice Naville D, Duchampt A, Vigier M, Oursel D, Lessire R, Poirier H, Niot I, Bégeot M, Besnard P, Mithieux ... PLoS ONE BMP 7: e30686 http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0030686
2012 Differential Effects of Bisphenol A and Diethylstilbestrol on Human, Rat and Mouse Fetal Leydig Cell Function N'Tumba-Byn T, Moison D, Lacroix M, Lecureuil C, Lesage L, Prud'homme S M, Pozzi-Gaudin S, Frydman R, ... PLoS ONE MetaTOUL 7(12): e51579 http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0051579
2012 Metabolic Fate of 2,4-Dichlorophenol and Related Plant Residues in Rats Pascal-Lorber S, Despoux S, Jamin E L, Canlet C, Cravedi J-P, Laurent F Journal of Agricultural and Food Chemistry MetaTOUL 60(7): p. 1728-1736 http://dx.doi.org/10.1021/jf203666k
2012 Plasma membrane localization of Solanum tuberosum remorin from Group 1, Homolog 3 is mediated by conformational changes in a novel C-terminal anchor and required for the restriction of Potato Virus X movement Perraki A, Cacas J-L, Crowet J-M, Lins L, Castroviejo M, German-Retana S, Mongrand S, Raffaele S Plant Physiology BMP 160: 624-637 http://www.ncbi.nlm.nih.gov/pubmed/22855937
2012 Co-consumption of methanol and succinate by Methylobacterium extorquens AM1. Peyraud R, Kiefer P, Christen P, Portais JC, Vorholt JA. PLoS One MetaTOUL 7(11):e48271 http://www.ncbi.nlm.nih.gov/pubmed/23133625
2012 Integration of pharmacokinetic and pharmacodynamic data for tulathromycin in healthy and pneumonic calves Potter TJ, Illambas J, Rycroft A, Toutain PL, Lacroix MZ, Lees P Journal of Veterinary Pharmacology and Therapeutics MetaTOUL 35:76 http://WOS:000310251900098
2012 Integration of pharmacokinetic and pharmacodynamic data for amoxicillin in healthy and pneumonic calves Potter TJ, Illambas J, Rycroft A, Toutain PL, Lacroix MZ, Lees P Journal of Veterinary Pharmacology and Therapeutics MetaTOUL 35:76 http://WOS:000310251900098
2012 Novel fragmentation pathways of anionic adducts of steroids formed by electrospray anion attachment involving regioselective attachment, regiospecific decompositions, charge-induced pathways, and ion-dipole complex intermediates. Rannulu NS, Cole RB J Am Soc Mass Spectrom MetabolomeIDF 23(9):1558-68 http://link.springer.com/article/10.1007%2Fs13361-012-0422-y
2012 Phenotypic prediction based on metabolomic data for growing pigs from three main European breeds Rohart F, Paris A, Laurent B, Canlet C, Molina J, Mercat M J, Tribout T, Muller N, Iannuccelli N, Villa-Vialaneix ... Journal of Animal Science MetaTOUL 90(13): p. 4729-4740 http://journalofanimalscience.org/content/90/13/4729.abstract?sid=764a816d-db9c-4bb5-a62d-7738a9678fa0
2012 Contribution of the nuclear receptors PXR and CAR to gene expression modulations induced by fipronil in rodent liver Roques B, Lacroix MZ, Moussaoui N, Leghait J, Puel S, Lasserre F, Guillou H, Viguié C, Martin P Journal of Veterinary Pharmacology and Therapeutics MetaTOUL 35:43-44 http://WOS:000310251900098
2012 CYP450-dependent biotransformation of the insecticide fipronil into fipronil sulfone can mediate fipronil-induced thyroid disruption in rats Roques B B, Lacroix M Z, Puel S, Gayrard V, Picard-Hagen N, Jouanin I, Perdu E, Martin P G, Viguié C Toxicological Science MetaTOUL 127(1): p. 29-41 http://toxsci.oxfordjournals.org/content/127/1/29
2012 Annotation of the human adult urinary metabolome and metabolite identification using ultra high performance liquid chromatography coupled to a linear quadrupole ion trap-orbitrap mass spectrometer Roux A, Xu Y, Heilier JF, Olivier MF, Ezan E, Tabet JC, Junot C. Analytical Chemistry MetabolomeIDF 84(15):6429-37 http://pubs.acs.org/doi/abs/10.1021/ac300829f
2012 TNF? gene knockout differentially affects lipid deposition in liver and skeletal muscle of high-fat-diet mice Salles J, Tardif N, Landrier JF, Mothe-Satney I, Guillet C, Boue-Vaysse C, Combaret L, Giraudet C, Patrac ... Journal of Nutritional Biochemistry MetaTOUL 23(12):1685-93 http://www.ncbi.nlm.nih.gov/pubmed/?term=TNF%CE%B1+gene+knockout+differentially+affects+lipid+deposition+in+liver+and+skeletal+muscle+of+high-fat-diet+mice
2012 Towards interoperable bioscience data Sansone S-A, Rocca-Serra P, Field D, E. Maguire CT, W. Hide,, O. Hofmann HF, S. Neumann, W. Tong, L. ... Nature Genetics BMP 44: 121-126 http://www.ncbi.nlm.nih.gov/pubmed/22281772
2012 The ethylmalonyl-CoA pathway is used in place of the glyoxylate cycle by Methylobacterium extorquens AM1 during growth on acetate Schneider K, Peyraud R, Kiefer P, Christen P, Delmotte N, Massou S, Portais JC, Vorholt JA The Journal of Biological Chemistry MetaTOUL 287(1):757-66 http://www.ncbi.nlm.nih.gov/pubmed/22105076
2012 influx_s: increasing numerical stability and precision for metabolic flux analysis in isotope labelling experiments. Sokol S, Millard P, Portais JC. Bioinformatics MetaTOUL 28(5):687-93 http://www.ncbi.nlm.nih.gov/pubmed/22210866
2012 Distinctive gas-phase fragmentation pathway of the mitorubramines, novel secondary metabolites from Hypoxylon fragiforme. Svilar L, Stankov-Jovanovic V, Stadler M, Nedev H, Tabet JC Rapid Commun Mass Spectrom MetabolomeIDF 26(22):2612-8 http://onlinelibrary.wiley.com/doi/10.1002/rcm.6382/abstract,jsessionid=6F96EFCEDF61D7D6AC661E7E51993AA2.f04t02
2012 High-resolution mass spectrometry and hydrogen/deuterium exchange study of mitorubrin azaphilones and nitrogenized analogues. Svilar L, Stankov-Jovanovic V, Lesage D, Dossmann H, Tabet JC. J Mass Spectrom MetabolomeIDF 47(8):969-77 http://onlinelibrary.wiley.com/doi/10.1002/jms.3044/abstract
2012 Evaluation of three simple direct or indirect carbonyl detection methods for characterization of oxidative modifications of proteins Vasquez-Garzon V R, Rouimi P, Jouanin I, Waeg G, Zarkovic N, Villa-Trevino S, Guéraud F Toxicology Mechanisms and Methods MetaTOUL 22(4): 296-304 http://informahealthcare.com/doi/abs/10.3109/15376516.2012.657258